RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PHKA2P46019 1235 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 UAP1Q16222 522 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-201ENST00000262539 HSP90AA4PQ58FG1 418 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 EMBQ6PCB8 327 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 ZNF720Q7Z2F6 126 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 HDXQ7Z353 690 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 IFT20Q8IY31 132 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 RAVER2Q9HCJ3 691 aaKnown RBP8.88□□□□□ -0.99
PTPN3-201ENST00000262539 PRMT7Q9NVM4 692 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-201ENST00000262539 AIPL1Q9NZN9 384 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 MTRF1LQ9UGC7 380 aaKnown RBP8.88□□□□□ -0.99
PTPN3-201ENST00000262539 KCNH4Q9UQ05 1017 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 ARAP2Q8WZ64 1704 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 POTEFA5A3E0 1075 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 RRN3P2A6NIE6 340 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 PP2D1A8MPX8 630 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 K7ERI5 159 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 TNNC2P02585 160 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 POTEIP0CG38 1075 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 POTEGQ6S5H5 508 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 POTEEQ6S8J3 1075 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 C4orf50Q6ZRC1 276 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 FBXL13Q8NEE6 735 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 TBC1D31Q96DN5 1066 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 CCDC77Q9BR77 488 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 NRBP1Q9UHY1 535 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 TRPC6Q9Y210 931 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 BTAF1O14981 1849 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 ZEB2O60315 1214 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 MAPK4P31152 587 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 RSPH3Q86UC2 560 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 NCAPG2Q86XI2 1143 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.88□□□□□ -0.99
PTPN3-201ENST00000262539 FBF1Q8TES7 1133 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 ZNF302Q9NR11 478 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 AMFRQ9UKV5 643 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 BTNL10A8MVZ5 291 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 PJA2O43164 708 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 ALDH1A1P00352 501 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 RARRES1P49788 294 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 LMNB2Q03252 620 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 HNRNPLLQ8WVV9 542 aaKnown RBP8.88□□□□□ -0.99
PTPN3-201ENST00000262539 SEZ6LQ9BYH1 1024 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 WNK3Q9BYP7 1800 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 IGLV3-22A0A075B6J6 115 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 KPNA6O60684 536 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 GGPS1O95749 300 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 GYPCP04921 128 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 ECE1P42892 770 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 POLR2FP61218 127 aaKnown RBP8.88□□□□□ -0.99
PTPN3-201ENST00000262539 BFSP1Q12934 665 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 MAPK6Q16659 721 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 CCDC94Q9BW85 323 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-201ENST00000262539 BCORQ6W2J9 1755 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 GNAT1P11488 350 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 NAMPTP43490 491 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 STAT5BP51692 787 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 MKRN3Q13064 507 aaKnown RBP8.88□□□□□ -0.99
PTPN3-201ENST00000262539 PPP1R7Q15435 360 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 C1orf186Q6ZWK4 172 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 MAP4K3Q8IVH8 894 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 SLC35C1Q96A29 364 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 RAB17Q9H0T7 212 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 VAV3Q9UKW4 847 aa8.88□□□□□ -0.99
PTPN3-201ENST00000262539 INPP5BP32019 993 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 GCNT1Q02742 428 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 SEL1L2Q5TEA6 688 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 DUSP9Q99956 384 aaKnown RBP8.87□□□□□ -0.99
PTPN3-201ENST00000262539 TMEM253P0C7T8 217 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 BMP6P22004 513 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 NTPCRQ9BSD7 190 aaKnown RBP8.87□□□□□ -0.99
PTPN3-201ENST00000262539 FOXP3Q9BZS1 431 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 NHEJ1Q9H9Q4 299 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-201ENST00000262539 C4AP0C0L4 1744 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 YWHABP31946 246 aaKnown RBP8.87□□□□□ -0.99
PTPN3-201ENST00000262539 PDE6CP51160 858 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 GTF2BQ00403 316 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 SLC35G1Q2M3R5 365 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 NBPF9Q3BBW0 867 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 SESTD1Q86VW0 696 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 ZC3H3Q8IXZ2 948 aaKnown RBP8.87□□□□□ -0.99
PTPN3-201ENST00000262539 CCHCR1Q8TD31 782 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 IPO4Q8TEX9 1081 aaKnown RBP8.87□□□□□ -0.99
PTPN3-201ENST00000262539 SCFD1Q8WVM8 642 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 RFFLQ8WZ73 363 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 UIMC1Q96RL1 719 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 TOPORSQ9NS56 1045 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-201ENST00000262539 WDR35Q9P2L0 1181 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 SMIM23A6NLE4 172 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 SUPT20HL2P0C7V6 817 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 TAP1Q03518 808 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 CLEC10AQ8IUN9 316 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 KIAA1257Q9ULG3 409 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 TEX33O43247 280 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 MED24O75448 989 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 PGM5Q15124 567 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 PEX26Q7Z412 305 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 GPD1LQ8N335 351 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 TMEM134Q9H6X4 195 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 AGO4Q9HCK5 861 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms