RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 POLR2MP0CAP2 368 aa14.89□□□□□ -0.03
SGCA-201ENST00000262018 CMA1P23946 247 aa14.89□□□□□ -0.03
SGCA-201ENST00000262018 FAM160A1Q05DH4 1040 aa14.89□□□□□ -0.03
SGCA-201ENST00000262018 SNW1Q13573 536 aaKnown RBP14.89□□□□□ -0.03
SGCA-201ENST00000262018 MARCH8Q5T0T0 291 aa14.89□□□□□ -0.03
SGCA-201ENST00000262018 FAM102BQ5T8I3 360 aa14.89□□□□□ -0.03
SGCA-201ENST00000262018 PPP1R18Q6NYC8 613 aa14.89□□□□□ -0.03
SGCA-201ENST00000262018 RBM43Q6ZSC3 357 aaKnown RBP14.89□□□□□ -0.03
SGCA-201ENST00000262018 TMC7Q7Z402 723 aa14.89□□□□□ -0.03
SGCA-201ENST00000262018 SAMD3Q8N6K7 520 aa14.89□□□□□ -0.03
SGCA-201ENST00000262018 C12orf76Q8N812 135 aaPredicted RBP14.89□□□□□ -0.03
SGCA-201ENST00000262018 INPP4AQ96PE3 977 aaPredicted RBP14.89□□□□□ -0.03
SGCA-201ENST00000262018 TMX1Q9H3N1 280 aa14.89□□□□□ -0.03
SGCA-201ENST00000262018 PCDHB6Q9Y5E3 794 aa14.89□□□□□ -0.03
SGCA-201ENST00000262018 HCFC2Q9Y5Z7 792 aa14.89□□□□□ -0.03
SGCA-201ENST00000262018 BAHCC1Q9P281 2608 aa14.88□□□□□ -0.03
SGCA-201ENST00000262018 MAP1BP46821 2468 aaKnown RBP14.88□□□□□ -0.03
SGCA-201ENST00000262018 DOCK5Q9H7D0 1870 aa14.88□□□□□ -0.03
SGCA-201ENST00000262018 LAG3P18627 525 aa14.88□□□□□ -0.03
SGCA-201ENST00000262018 MARCKSP29966 332 aaPredicted RBP14.88□□□□□ -0.03
SGCA-201ENST00000262018 TCF7P36402 384 aaPredicted RBP14.88□□□□□ -0.03
SGCA-201ENST00000262018 NAPAP54920 295 aa14.88□□□□□ -0.03
SGCA-201ENST00000262018 MRPS9P82933 396 aaKnown RBP14.88□□□□□ -0.03
SGCA-201ENST00000262018 PLCB3Q01970 1234 aa14.88□□□□□ -0.03
SGCA-201ENST00000262018 NFX1Q12986 1120 aaKnown RBP14.88□□□□□ -0.03
SGCA-201ENST00000262018 TMEM266Q2M3C6 531 aa14.88□□□□□ -0.03
SGCA-201ENST00000262018 GRPEL1Q9HAV7 217 aa14.88□□□□□ -0.03
SGCA-201ENST00000262018 C6orf50Q9HD87 102 aa14.88□□□□□ -0.03
SGCA-201ENST00000262018 CYP26B1Q9NR63 512 aa14.88□□□□□ -0.03
SGCA-201ENST00000262018 FAM237AA0A1B0GTK4 181 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 RFX1P22670 979 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 GNA11P29992 359 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 TDGQ13569 410 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 ATAT1Q5SQI0 421 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 KANK3Q6NY19 840 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 ZC3H14Q6PJT7 736 aaKnown RBP14.87□□□□□ -0.03
SGCA-201ENST00000262018 PIK3AP1Q6ZUJ8 805 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 TEX2Q8IWB9 1127 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 FMR1NBQ8N0W7 255 aaPredicted RBP14.87□□□□□ -0.03
SGCA-201ENST00000262018 KRI1Q8N9T8 703 aaKnown RBP14.87□□□□□ -0.03
SGCA-201ENST00000262018 TSPY26PQ9H489 355 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 CWH43Q9H720 699 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 PCDHA6Q9UN73 950 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 USTQ9Y2C2 406 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 PCDHA8Q9Y5H6 950 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 IGSF9BQ9UPX0 1349 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 CHD6Q8TD26 2715 aa14.87□□□□□ -0.03
SGCA-201ENST00000262018 SMCO2A6NFE2 343 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 MGEA5O60502 916 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 STAM2O75886 525 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 EOMESO95936 686 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 RPLP2P05387 115 aaKnown RBP14.86□□□□□ -0.03
SGCA-201ENST00000262018 CA8P35219 290 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 TTC38Q5R3I4 469 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 KIAA1841Q6NSI8 718 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 GLG1Q92896 1179 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 FUCA2Q9BTY2 467 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 CELF4Q9BZC1 486 aaKnown RBP14.86□□□□□ -0.03
SGCA-201ENST00000262018 TNMDQ9H2S6 317 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 RNF216Q9NWF9 866 aaPredicted RBP14.86□□□□□ -0.03
SGCA-201ENST00000262018 ERAP1Q9NZ08 941 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 FBXO2Q9UK22 296 aaPredicted RBP14.86□□□□□ -0.03
SGCA-201ENST00000262018 DUSP12Q9UNI6 340 aa14.86□□□□□ -0.03
SGCA-201ENST00000262018 CCDC194A0A1B0GVG4 234 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 A0A1B0GVL5 298 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 DENND3A2RUS2 1198 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 CLASP2O75122 1294 aaKnown RBP14.85□□□□□ -0.03
SGCA-201ENST00000262018 FGFR1P11362 822 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 XRCC6P12956 609 aaKnown RBP eCLIP14.85□□□□□ -0.03
SGCA-201ENST00000262018 NDUFA8P51970 172 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 KRT17Q04695 432 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 SMC1AQ14683 1233 aaKnown RBP14.85□□□□□ -0.03
SGCA-201ENST00000262018 KIAA0319Q5VV43 1072 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 RESP18Q5W5W9 173 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 SHC4Q6S5L8 630 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
SGCA-201ENST00000262018 CUL5Q93034 780 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 ACSF2Q96CM8 615 aaPredicted RBP14.85□□□□□ -0.03
SGCA-201ENST00000262018 ADAM2Q99965 735 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 GLT8D2Q9H1C3 349 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 PSTPIP2Q9H939 334 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 HPSEQ9Y251 543 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 SRPRBQ9Y5M8 271 aaKnown RBP14.85□□□□□ -0.03
SGCA-201ENST00000262018 FNDC1Q4ZHG4 1894 aaPredicted RBP14.85□□□□□ -0.03
SGCA-201ENST00000262018 CHD8Q9HCK8 2581 aa14.85□□□□□ -0.03
SGCA-201ENST00000262018 C2orf71A6NGG8 1288 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 RRN3P2A6NIE6 340 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 PIK3CDO00329 1044 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 WNT7AO00755 349 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 KINO60870 393 aaKnown RBP14.84□□□□□ -0.03
SGCA-201ENST00000262018 INSRRP14616 1297 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 PFKFB1P16118 471 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 ATP2B1P20020 1258 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 PBX3P40426 434 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 ATXN1P54253 815 aaKnown RBP14.84□□□□□ -0.03
SGCA-201ENST00000262018 KCNT2Q6UVM3 1135 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 KRT25Q7Z3Z0 450 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 MRPL43Q8N983 215 aaKnown RBP14.84□□□□□ -0.03
SGCA-201ENST00000262018 ZNF558Q96NG5 402 aa14.84□□□□□ -0.03
SGCA-201ENST00000262018 SENP7Q9BQF6 1050 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms