RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHRNA1-201ENST00000261007 SEL1LQ9UBV2 794 aa11.7□□□□□ -0.54
CHRNA1-201ENST00000261007 RGS17Q9UGC6 210 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-201ENST00000261007 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-201ENST00000261007 UBE4BO95155 1302 aa11.7□□□□□ -0.54
CHRNA1-201ENST00000261007 COL4A5P29400 1685 aa11.7□□□□□ -0.54
CHRNA1-201ENST00000261007 ATAD5Q96QE3 1844 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 PDXKO00764 312 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 KCNK3O14649 394 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 EIF3DO15371 548 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 SART1O43290 800 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 ICAM1P05362 532 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 FDX1P10109 184 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 BCRP11274 1271 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 PRELPP51888 382 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 GHRHRQ02643 423 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 CXCL9Q07325 125 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 GRIK3Q13003 919 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 PPP2R5AQ15172 486 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 LRRC41Q15345 812 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 KNOP1Q1ED39 458 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 CEP55Q53EZ4 464 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 ARSHQ5FYA8 562 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 FRMD5Q7Z6J6 570 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 HOOK3Q86VS8 718 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 TRIM59Q8IWR1 403 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 RASGEF1CQ8N431 466 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 ZNF317Q96PQ6 595 aaPredicted RBP11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 TMEM39BQ9GZU3 492 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 CCDC134Q9H6E4 229 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 METTL14Q9HCE5 456 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 OLFML3Q9NRN5 406 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 PGAP2Q9UHJ9 254 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 EP400Q96L91 3159 aa11.69□□□□□ -0.54
CHRNA1-201ENST00000261007 PHF20L1A8MW92 1017 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 F8VZ95 297 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 WNT10BO00744 389 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 SLC16A3O15427 465 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 GAS7O60861 476 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 PPFIA2O75334 1257 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 PSMD10O75832 226 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 ANXA13P27216 316 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 EPS15P42566 896 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 PTGER2P43116 358 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 ZNF280AP59817 542 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 PABPC4Q13310 644 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 ADAM9Q13443 819 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 ZNF268Q14587 947 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 NAA25Q14CX7 972 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 PPP1R7Q15435 360 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 KRT71Q3SY84 523 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 DALRD3Q5D0E6 543 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 HIBCHQ6NVY1 386 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 CCDC174Q6PII3 467 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 EPM2AIP1Q7L775 607 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 OTOP1Q7RTM1 612 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 CROCCP2Q86T23 111 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 LDHDQ86WU2 507 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 LMBR1Q8WVP7 490 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 RIT2Q99578 217 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 HSD17B14Q9BPX1 270 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 MOV10L1Q9BXT6 1211 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 TXLNGYQ9BZA5 131 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 NEUROG2Q9H2A3 272 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 TYW1Q9NV66 732 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 BZW2Q9Y6E2 419 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 A0A087X0T9 212 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 CEP104O60308 925 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 BUB1BO60566 1050 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 FAM228BP0C875 321 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 ZBTB48P10074 688 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 ALADP13716 330 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 POLD1P28340 1107 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 HSD17B4P51659 736 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 KLHL30Q0D2K2 578 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 EPHA7Q15375 998 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 ASIC2Q16515 512 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 PPP2R5EQ16537 467 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 NFIL3Q16649 462 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 KIAA1755Q5JYT7 1200 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 LRRC57Q8N9N7 239 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 PGM2Q96G03 612 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 NACC1Q96RE7 527 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 REEP2Q9BRK0 252 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 TEKT3Q9BXF9 490 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 ZHX3Q9H4I2 956 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 NLRC4Q9NPP4 1024 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 BAIAP2L1Q9UHR4 511 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 PACSIN2Q9UNF0 486 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 C15orf41Q9Y2V0 281 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 FER1L6Q2WGJ9 1857 aa11.68□□□□□ -0.54
CHRNA1-201ENST00000261007 MEIS1O00470 390 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 NUDT17P0C025 328 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 DNA2P51530 1060 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 RNASE9P60153 205 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 SFR1Q86XK3 245 aa11.67□□□□□ -0.54
CHRNA1-201ENST00000261007 DDX42Q86XP3 938 aaKnown RBP eCLIP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms