RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 TBC1D22BQ9NU19 505 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 ARGLU1Q9NWB6 273 aaPredicted RBP19.3■□□□□ 0.68
SSB-201ENST00000260956 SAR1BQ9Y6B6 198 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 ATP8B3O60423 1300 aa19.3■□□□□ 0.68
SSB-201ENST00000260956 MACROD2A1Z1Q3 448 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 CTAGE15A4D2H0 777 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 CCDC151A5D8V7 595 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 PDE2AO00408 941 aaPredicted RBP19.29■□□□□ 0.68
SSB-201ENST00000260956 ATP9AO75110 1047 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 CTAGE8P0CG41 777 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 MYBPC2Q14324 1141 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 XRRA1Q6P2D8 792 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 CTAGE6Q86UF2 777 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 CTAGE4Q8IX94 777 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 TRIM58Q8NG06 486 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 ST6GALNAC4Q9H4F1 302 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 PKD2L1Q9P0L9 805 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 IVNS1ABPQ9Y6Y0 642 aa19.29■□□□□ 0.68
SSB-201ENST00000260956 ATP8B1O43520 1251 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 SASH3O75995 380 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 SEC31AO94979 1220 aaKnown RBP19.28■□□□□ 0.68
SSB-201ENST00000260956 MYCP01106 439 aaPredicted RBP19.28■□□□□ 0.68
SSB-201ENST00000260956 IGHA2P01877 340 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 GRK4P32298 578 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 MAGEA1P43355 309 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 QARSP47897 775 aaKnown RBP19.28■□□□□ 0.68
SSB-201ENST00000260956 BRD3Q15059 726 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 SLC18A3Q16572 532 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 EXOC3L4Q17RC7 722 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 ODR4Q5SWX8 454 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 RNF207Q6ZRF8 634 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 C12orf56Q8IXR9 622 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 C4orf19Q8IY42 314 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 FAM186BQ8IYM0 893 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 HNRNPLLQ8WVV9 542 aaKnown RBP19.28■□□□□ 0.68
SSB-201ENST00000260956 SOCS4Q8WXH5 440 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 INPP4AQ96PE3 977 aaPredicted RBP19.28■□□□□ 0.68
SSB-201ENST00000260956 MMS19Q96T76 1030 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 MMP19Q99542 508 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 A1CFQ9NQ94 594 aaKnown RBP19.28■□□□□ 0.68
SSB-201ENST00000260956 DNAH12Q6ZR08 3092 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 DOCK5Q9H7D0 1870 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 DNAJC25-GNG10A0A024R161 153 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 A0A087X0T9 212 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 POTEB2H3BUK9 544 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 USO1O60763 962 aaKnown RBP19.28■□□□□ 0.68
SSB-201ENST00000260956 HOXC6P09630 235 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 FAM228BP0C875 321 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 PRLRP16471 622 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 PSMC2P35998 433 aaKnown RBP19.28■□□□□ 0.68
SSB-201ENST00000260956 PLA2G4AP47712 749 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 RAPGEF1Q13905 1077 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 TMCO3Q6UWJ1 677 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 VSIG10LQ86VR7 867 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 ABRAQ8N0Z2 381 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 FGD4Q96M96 766 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 RMDN3Q96TC7 470 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 SENP7Q9BQF6 1050 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 GBP3Q9H0R5 595 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 SNX12Q9UMY4 172 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 JRKLQ9Y4A0 524 aa19.28■□□□□ 0.68
SSB-201ENST00000260956 LRRC37A2A6NM11 1700 aa19.27■□□□□ 0.68
SSB-201ENST00000260956 SRGAP2O75044 1071 aa19.27■□□□□ 0.68
SSB-201ENST00000260956 STBD1O95210 358 aa19.27■□□□□ 0.68
SSB-201ENST00000260956 MOCS3O95396 460 aa19.27■□□□□ 0.68
SSB-201ENST00000260956 BAATQ14032 418 aaPredicted RBP19.27■□□□□ 0.68
SSB-201ENST00000260956 BMS1Q14692 1282 aaKnown RBP19.27■□□□□ 0.68
SSB-201ENST00000260956 ASIC2Q16515 512 aa19.27■□□□□ 0.68
SSB-201ENST00000260956 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.27■□□□□ 0.68
SSB-201ENST00000260956 KRT222Q8N1A0 295 aa19.27■□□□□ 0.68
SSB-201ENST00000260956 FAM133AQ8N9E0 248 aa19.27■□□□□ 0.68
SSB-201ENST00000260956 CHST13Q8NET6 341 aa19.27■□□□□ 0.68
SSB-201ENST00000260956 ARMC5Q96C12 935 aa19.27■□□□□ 0.68
SSB-201ENST00000260956 DEF6Q9H4E7 631 aa19.27■□□□□ 0.68
SSB-201ENST00000260956 RGS20O76081 388 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 RGS2P41220 211 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 JAK3P52333 1124 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 CNTN2Q02246 1040 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 ALCAMQ13740 583 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 KCTD2Q14681 263 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 MTFR1Q15390 333 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 ZNF792Q3KQV3 632 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 TDRD12Q587J7 1177 aaKnown RBP19.26■□□□□ 0.67
SSB-201ENST00000260956 DCAF17Q5H9S7 520 aaPredicted RBP19.26■□□□□ 0.67
SSB-201ENST00000260956 GBP6Q6ZN66 633 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 STXBP4Q6ZWJ1 553 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 RNF10Q8N5U6 811 aaKnown RBP19.26■□□□□ 0.67
SSB-201ENST00000260956 RDM1Q8NG50 284 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 GOLGA5Q8TBA6 731 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 PXYLP1Q8TE99 480 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 GPRASP2Q96D09 838 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 ZNF333Q96JL9 665 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 APBA2Q99767 749 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 SYT11Q9BT88 431 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 FUT8Q9BYC5 575 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 ACAD9Q9H845 621 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 GCNT4Q9P109 453 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 PCDHB13Q9Y5F0 798 aa19.26■□□□□ 0.67
SSB-201ENST00000260956 BTNL10A8MVZ5 291 aa19.25■□□□□ 0.67
SSB-201ENST00000260956 BACH1O14867 736 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms