RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
USP30-201ENST00000257548 USP40Q9NVE5 1235 aa13.23□□□□□ -0.29
USP30-201ENST00000257548 ZFP69BQ9UJL9 534 aa13.23□□□□□ -0.29
USP30-201ENST00000257548 KIF3CO14782 793 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 RIMBP2O15034 1052 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 PJA2O43164 708 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 NCALDP61601 193 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 LAMB3Q13751 1172 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 C6orf89Q6UWU4 347 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 DPP8Q6V1X1 898 aaPredicted RBP13.22□□□□□ -0.29
USP30-201ENST00000257548 CTAGE3PQ8IX95 158 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 CELF1Q92879 486 aaKnown RBP13.22□□□□□ -0.29
USP30-201ENST00000257548 C5P01031 1676 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 CYTH3O43739 400 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 MYBP10242 640 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 KRT17Q04695 432 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 ODR4Q5SWX8 454 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 SLC30A5Q8TAD4 765 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 ACTRT1Q8TDG2 376 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 STOML1Q9UBI4 398 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 PCDHA1Q9Y5I3 950 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 SLIT3O75094 1523 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 PODXLO00592 558 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 ESRRAP11474 423 aaPredicted RBP13.22□□□□□ -0.29
USP30-201ENST00000257548 ATP4AP20648 1035 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 RPL21P46778 160 aaKnown RBP13.22□□□□□ -0.29
USP30-201ENST00000257548 GCLMP48507 274 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 SP4Q02446 784 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 TCP10Q12799 353 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 SYCP2LQ5T4T6 812 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 SAYSD1Q9NPB0 183 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 BLOC1S4Q9NUP1 217 aa13.22□□□□□ -0.29
USP30-201ENST00000257548 DPPA5A6NC42 116 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 GOLGA8IPA6NC78 632 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 GOLGA8JA6NMD2 632 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 NVLO15381 856 aaKnown RBP13.21□□□□□ -0.29
USP30-201ENST00000257548 PPIP5K2O43314 1243 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 CIB2O75838 187 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 GHRP10912 638 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 IRX4P78413 519 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 COG7P83436 770 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 MYL7Q01449 175 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 ZC2HC1CQ53FD0 456 aaPredicted RBP13.21□□□□□ -0.29
USP30-201ENST00000257548 RNF207Q6ZRF8 634 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 STXBP4Q6ZWJ1 553 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 FBXO41Q8TF61 875 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 MAML1Q92585 1016 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
USP30-201ENST00000257548 FAM84BQ96KN1 310 aaPredicted RBP13.21□□□□□ -0.29
USP30-201ENST00000257548 IKZF4Q9H2S9 585 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 METTL14Q9HCE5 456 aaKnown RBP13.21□□□□□ -0.29
USP30-201ENST00000257548 C2CD2Q9Y426 696 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 RSPH10B2B2RC85 870 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 KCNQ2O43526 872 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 RSPH10BP0C881 870 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 NMT1P30419 496 aaKnown RBP13.21□□□□□ -0.29
USP30-201ENST00000257548 MARCKSL1P49006 195 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
USP30-201ENST00000257548 ITIH4Q14624 930 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 RCN1Q15293 331 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 KNOP1Q1ED39 458 aaKnown RBP13.21□□□□□ -0.29
USP30-201ENST00000257548 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.21□□□□□ -0.29
USP30-201ENST00000257548 ERFEQ4G0M1 354 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 RNF220Q5VTB9 566 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 EGFL6Q8IUX8 553 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.21□□□□□ -0.29
USP30-201ENST00000257548 KRT35Q92764 455 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 TNFRSF25Q93038 417 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 FAM161BQ96MY7 647 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 RIOK1Q9BRS2 568 aaKnown RBP13.21□□□□□ -0.29
USP30-201ENST00000257548 CDC42EP4Q9H3Q1 356 aaKnown RBP13.21□□□□□ -0.29
USP30-201ENST00000257548 ERVK-5Q9HDB9 667 aa13.21□□□□□ -0.29
USP30-201ENST00000257548 MAP3K7O43318 606 aa13.21□□□□□ -0.3
USP30-201ENST00000257548 CFBP00751 764 aa13.21□□□□□ -0.3
USP30-201ENST00000257548 PON1P27169 355 aa13.21□□□□□ -0.3
USP30-201ENST00000257548 PHLDB3Q6NSJ2 640 aa13.21□□□□□ -0.3
USP30-201ENST00000257548 LRRC15Q8TF66 581 aa13.21□□□□□ -0.3
USP30-201ENST00000257548 MTA3Q9BTC8 594 aa13.21□□□□□ -0.3
USP30-201ENST00000257548 SLCO1B3Q9NPD5 702 aa13.21□□□□□ -0.3
USP30-201ENST00000257548 KLHL11Q9NVR0 708 aa13.21□□□□□ -0.3
USP30-201ENST00000257548 CCDC189A1A4V9 331 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 KITP10721 976 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 COMTP21964 271 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 HOXA13P31271 388 aaPredicted RBP13.2□□□□□ -0.3
USP30-201ENST00000257548 NBPF20Q3BBV1 942 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 TTBK2Q6IQ55 1244 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 PPP1R21Q6ZMI0 780 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 TTC17Q96AE7 1141 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 CCDC124Q96CT7 223 aaKnown RBP13.2□□□□□ -0.3
USP30-201ENST00000257548 CEP63Q96MT8 703 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 ZNF570Q96NI8 536 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 LZTS2Q9BRK4 669 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 RHBDL2Q9NX52 303 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 ETAA1Q9NY74 926 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 RGL1Q9NZL6 768 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP30-201ENST00000257548 ABCC6O95255 1503 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 CHRNA3P32297 505 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 PSMC2P35998 433 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms