RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 EHD2Q9NZN4 543 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 STK36Q9NRP7 1315 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 EFCAB6Q5THR3 1501 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 MEIS1O00470 390 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 PMS2P54278 862 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 RESTQ13127 1097 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 SEMA3FQ13275 785 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 NFRKBQ6P4R8 1299 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 KCTD1Q719H9 257 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 DCAF4Q8WV16 495 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 LEMD3Q9Y2U8 911 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 LRRC53A6NM62 1247 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 HNRNPH2P55795 449 aaKnown RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 ROR1Q01973 937 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 PLEKHM3Q6ZWE6 761 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 PLD3Q8IV08 490 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 TAF1DQ9H5J8 278 aaPredicted RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 NGRNQ9NPE2 291 aaKnown RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 TLR7Q9NYK1 1049 aaKnown RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 LRFN2Q9ULH4 789 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 TCP10L2B9ZVM9 353 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 HNRNPCP07910 306 aaKnown RBP eCLIP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 CRKLP46109 303 aaKnown RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ARHGEF6Q15052 776 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 KIAA2013Q8IYS2 634 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 XXYLT1Q8NBI6 393 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 MCPH1Q8NEM0 835 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ULK4Q96C45 1275 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 EPN3Q9H201 632 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 KIAA1586Q9HCI6 787 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 DDX28Q9NUL7 540 aaKnown RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 PRRC2BQ5JSZ5 2229 aaKnown RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 PRDM15P57071 1507 aaPredicted RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 E5RI56 91 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ESRRBO95718 433 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 DHX34Q14147 1143 aaKnown RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 IMPG1Q17R60 797 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ZC3H12BQ5HYM0 836 aaKnown RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 HEATR6Q6AI08 1181 aaKnown RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 TMEM35BQ8NCS4 154 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 PI4K2BG5E9Z4 385 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 IRX1P78414 480 aaPredicted RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 CDO1Q16878 200 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 TOPORSQ9NS56 1045 aaPredicted RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 GIMAP4Q9NUV9 329 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ZFATQ9P243 1243 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 RP1P56715 2156 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 PPEF1O14829 653 aaPredicted RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ARMC2Q8NEN0 867 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 PBXIP1Q96AQ6 731 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 TRIM62Q9BVG3 475 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 SRGAP2O75044 1071 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 PSMD7P51665 324 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 Q3C1V9 767 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 C1orf228Q6PIY5 440 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ARL2BPQ9Y2Y0 163 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 TBC1D4O60343 1298 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ANP32DO95626 131 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 OCM2P0CE71 109 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 OCMP0CE72 109 aaPredicted RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 LRRC24Q50LG9 513 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 CDKL3Q8IVW4 592 aaPredicted RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 KDM4CQ9H3R0 1056 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 SNX24Q9Y343 169 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ARHGEF40Q8TER5 1519 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 FAM187AA6NFU0 413 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 C16orf96A6NNT2 1141 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 STXBP3O00186 592 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 GIMAP8Q8ND71 665 aaPredicted RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 BFARQ9NZS9 450 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 GOLGA8TH3BQL2 631 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 WDR47O94967 919 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 CDC25AP30304 524 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 PHKA2P46019 1235 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 MED21Q13503 144 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 FASTKD1Q53R41 847 aaKnown RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 SCFD1Q8WVM8 642 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 UBE4BO95155 1302 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 HADHAP40939 763 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 TNFAIP2Q03169 654 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ADNPQ9H2P0 1102 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 INPP5FQ9Y2H2 1132 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ARFIP2P53365 341 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 COG1Q8WTW3 980 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 CCDC90BQ9GZT6 254 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 MLXIPLQ9NP71 852 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 IP6K2Q9UHH9 426 aa7.16□□□□□ -1.26
CSMD2-201ENST00000241312 SMG5Q9UPR3 1016 aaKnown RBP7.16□□□□□ -1.26
CSMD2-201ENST00000241312 ADD2P35612 726 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 GPC5P78333 572 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 GUCY1A3Q02108 690 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 DMC1Q14565 340 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 SLC30A9Q6PML9 568 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 RAPGEF5Q92565 580 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 PCIF1Q9H4Z3 704 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 GREM2Q9H772 168 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 MAP2P11137 1827 aaKnown RBP7.15□□□□□ -1.26
CSMD2-201ENST00000241312 CFAP69A5D8W1 941 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 DNAJC6O75061 913 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms