RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 KCND1Q9NSA2 647 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 HACD3Q9P035 362 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 TUBE1Q9UJT0 475 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 NWD2Q9ULI1 1742 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 DCCP43146 1447 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 PALM3A6NDB9 673 aaPredicted RBP8.98□□□□□ -0.97
SPARC-201ENST00000231061 C6orf222P0C671 652 aaPredicted RBP8.98□□□□□ -0.97
SPARC-201ENST00000231061 CD86P42081 329 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 C21orf58P58505 322 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 COG2Q14746 738 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 NOSTRINQ8IVI9 506 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 GRAMD1CQ8IYS0 662 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 EIF2AQ9BY44 585 aaKnown RBP8.98□□□□□ -0.97
SPARC-201ENST00000231061 HPSEQ9Y251 543 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 PCDHB13Q9Y5F0 798 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 MINDY4BA8MYZ0 360 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 POLR2DO15514 142 aaKnown RBP8.98□□□□□ -0.97
SPARC-201ENST00000231061 B4GALT4O60513 344 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 UPP2O95045 317 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 APEHP13798 732 aaKnown RBP8.98□□□□□ -0.97
SPARC-201ENST00000231061 POU2F1P14859 743 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 B2MP61769 119 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 DTX3Q8N9I9 347 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 LRRN4CLQ8ND94 238 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 KRT23Q9C075 422 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 OCEL1Q9H607 264 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 ZNF624Q9P2J8 865 aaPredicted RBP8.98□□□□□ -0.97
SPARC-201ENST00000231061 LRP2BPQ9P2M1 347 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 MALT1Q9UDY8 824 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 SERTAD1Q9UHV2 236 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 SATB2Q9UPW6 733 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 IPPQ9Y573 584 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 TNS2Q63HR2 1409 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 PRRT4C9JH25 899 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 PLCD1P51178 756 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 RASGRF1Q13972 1273 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 ANKRD39Q53RE8 183 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 PCNX4Q63HM2 1172 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 SWSAP1Q6NVH7 229 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 TBC1D21Q8IYX1 336 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 CCDC116Q8IYX3 515 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 STK32AQ8WU08 396 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 ABTB1Q969K4 478 aaPredicted RBP8.98□□□□□ -0.97
SPARC-201ENST00000231061 ATP6V0A4Q9HBG4 840 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 SUCLA2Q9P2R7 463 aaPredicted RBP8.98□□□□□ -0.97
SPARC-201ENST00000231061 SH3GLB1Q9Y371 365 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 USH1CQ9Y6N9 552 aa8.98□□□□□ -0.97
SPARC-201ENST00000231061 A6NJY4 79 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 EXTL3O43909 919 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 GSTT2P0CG29 244 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 GSTT2BP0CG30 244 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 GRIN1Q05586 938 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 NR5A1Q13285 461 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 DPYSQ14117 519 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 NTRK3Q16288 839 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 ARHGAP29Q52LW3 1261 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 TMEM214Q6NUQ4 689 aaKnown RBP8.97□□□□□ -0.97
SPARC-201ENST00000231061 DPY19L2Q6NUT2 758 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 PPP1R21Q6ZMI0 780 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 INTS8Q75QN2 995 aaKnown RBP8.97□□□□□ -0.97
SPARC-201ENST00000231061 VSTM4Q8IW00 320 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 VGLL2Q8N8G2 317 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 PPP1R36Q96LQ0 422 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 PRPF18Q99633 342 aaKnown RBP8.97□□□□□ -0.97
SPARC-201ENST00000231061 UBAC1Q9BSL1 405 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 EDEM3Q9BZQ6 932 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 ADNPQ9H2P0 1102 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 TMEM206Q9H813 350 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 FAM217BQ9NTX9 383 aaPredicted RBP8.97□□□□□ -0.97
SPARC-201ENST00000231061 ITGB1BP2Q9UKP3 347 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 HEY1Q9Y5J3 304 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 H3BUI4 141 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 IGF2BP3O00425 579 aaKnown RBP eCLIP8.97□□□□□ -0.973e-6■■□□□ 12.4
SPARC-201ENST00000231061 ACTN4O43707 911 aaKnown RBP8.97□□□□□ -0.97
SPARC-201ENST00000231061 CASP2P42575 452 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 POLE2P56282 527 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 ETF1P62495 437 aaKnown RBP8.97□□□□□ -0.97
SPARC-201ENST00000231061 MDM2Q00987 491 aaPredicted RBP8.97□□□□□ -0.97
SPARC-201ENST00000231061 WSCD2Q2TBF2 565 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 SLC10A5Q5PT55 438 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 SGMS1Q86VZ5 419 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 LRRC47Q8N1G4 583 aaKnown RBP8.97□□□□□ -0.97
SPARC-201ENST00000231061 LCORLQ8N3X6 602 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 NLRP3Q96P20 1036 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 KIAA1683Q9H0B3 1180 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 C12orf4Q9NQ89 552 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 VPS45Q9NRW7 570 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.97□□□□□ -0.97
SPARC-201ENST00000231061 NFE2L3Q9Y4A8 694 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 TELO2Q9Y4R8 837 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 PARP4Q9UKK3 1724 aaKnown RBP8.97□□□□□ -0.97
SPARC-201ENST00000231061 TCRBV5S4A2TA0A5A2 114 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 CASQ2O14958 399 aaPredicted RBP8.97□□□□□ -0.97
SPARC-201ENST00000231061 MAP3K6O95382 1288 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 MMP1P03956 469 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 HEXBP07686 556 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 MZF1P28698 734 aaPredicted RBP8.97□□□□□ -0.97
SPARC-201ENST00000231061 ROR1Q01973 937 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 ARHGAP11AQ6P4F7 1023 aa8.97□□□□□ -0.97
SPARC-201ENST00000231061 RSRC2Q7L4I2 434 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms