RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 GABBR1Q9UBS5 961 aa20.84■□□□□ 0.93
YBX3-201ENST00000228251 TCEAL9Q9UHQ7 104 aa20.84■□□□□ 0.93
YBX3-201ENST00000228251 IGSF9BQ9UPX0 1349 aa20.83■□□□□ 0.93
YBX3-201ENST00000228251 A0A0A6YYK5 440 aaPredicted RBP20.83■□□□□ 0.93
YBX3-201ENST00000228251 ZBTB48P10074 688 aaPredicted RBP20.83■□□□□ 0.93
YBX3-201ENST00000228251 ICAM3P32942 547 aa20.83■□□□□ 0.93
YBX3-201ENST00000228251 C2orf54Q08AI8 447 aa20.83■□□□□ 0.93
YBX3-201ENST00000228251 VGLL4Q14135 290 aa20.83■□□□□ 0.93
YBX3-201ENST00000228251 ATP6V0A1Q93050 837 aa20.83■□□□□ 0.93
YBX3-201ENST00000228251 CCDC43Q96MW1 224 aaKnown RBP20.83■□□□□ 0.93
YBX3-201ENST00000228251 JPH1Q9HDC5 661 aaPredicted RBP20.83■□□□□ 0.93
YBX3-201ENST00000228251 TBX20Q9UMR3 447 aa20.83■□□□□ 0.93
YBX3-201ENST00000228251 EMSYQ7Z589 1322 aa20.83■□□□□ 0.92
YBX3-201ENST00000228251 ADRB2P07550 413 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 KRT13P13646 458 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 RTP1P59025 263 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 KIF22Q14807 665 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 FAM102BQ5T8I3 360 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 LBX2Q6XYB7 198 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 CCDC60Q8IWA6 550 aaPredicted RBP20.82■□□□□ 0.92
YBX3-201ENST00000228251 RDH13Q8NBN7 331 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 CHST13Q8NET6 341 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 KIFAP3Q92845 792 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 KCNN1Q92952 543 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 SUGCTQ9HAC7 445 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 XPNPEP1Q9NQW7 623 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 RNF14Q9UBS8 474 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 SLC9A2Q9UBY0 812 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 ANKRD63C9JTQ0 380 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 DKC1O60832 514 aaKnown RBP eCLIP20.82■□□□□ 0.92
YBX3-201ENST00000228251 N4BP1O75113 896 aaKnown RBP20.82■□□□□ 0.92
YBX3-201ENST00000228251 PSAPP07602 524 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 CXCR5P32302 372 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 ACTR2P61160 394 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 SLC39A4Q6P5W5 647 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 OTUD6AQ7L8S5 288 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 DNERQ8NFT8 737 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 RUBCNQ92622 972 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 FBXL18Q96ME1 805 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 PRDM10Q9NQV6 1147 aa20.82■□□□□ 0.92
YBX3-201ENST00000228251 ATG7O95352 703 aa20.81■□□□□ 0.92
YBX3-201ENST00000228251 FTCDO95954 541 aa20.81■□□□□ 0.92
YBX3-201ENST00000228251 SP2Q02086 613 aa20.81■□□□□ 0.92
YBX3-201ENST00000228251 TREML2Q5T2D2 321 aa20.81■□□□□ 0.92
YBX3-201ENST00000228251 HDXQ7Z353 690 aa20.81■□□□□ 0.92
YBX3-201ENST00000228251 SLFN11Q7Z7L1 901 aa20.81■□□□□ 0.92
YBX3-201ENST00000228251 VPS36Q86VN1 386 aa20.81■□□□□ 0.92
YBX3-201ENST00000228251 FMNL3Q8IVF7 1028 aa20.81■□□□□ 0.92
YBX3-201ENST00000228251 EHD2Q9NZN4 543 aa20.81■□□□□ 0.92
YBX3-201ENST00000228251 NCANO14594 1321 aa20.81■□□□□ 0.92
YBX3-201ENST00000228251 ADGRA3Q8IWK6 1321 aa20.81■□□□□ 0.92
YBX3-201ENST00000228251 CES2O00748 559 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 MCM3P25205 808 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 SWSAP1Q6NVH7 229 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 DLK2Q6UY11 383 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 CEP170P1Q96L14 293 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 PSMB7Q99436 277 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 RNF216Q9NWF9 866 aaPredicted RBP20.8■□□□□ 0.92
YBX3-201ENST00000228251 SMARCAL1Q9NZC9 954 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 ZNFX1Q9P2E3 1918 aaKnown RBP20.8■□□□□ 0.92
YBX3-201ENST00000228251 H2AFZP0C0S5 128 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 NAP1L1P55209 391 aaKnown RBP20.8■□□□□ 0.92
YBX3-201ENST00000228251 PRKCEQ02156 737 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 DMP1Q13316 513 aaPredicted RBP20.8■□□□□ 0.92
YBX3-201ENST00000228251 SMC1AQ14683 1233 aaKnown RBP20.8■□□□□ 0.92
YBX3-201ENST00000228251 GNPTABQ3T906 1256 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 H2AFVQ71UI9 128 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 DNAAF5Q86Y56 855 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 TPCN2Q8NHX9 752 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 KIFC3Q9BVG8 833 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 EXOC7Q9UPT5 735 aa20.8■□□□□ 0.92
YBX3-201ENST00000228251 DENND3A2RUS2 1198 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 LRRN2O75325 713 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 DGAT1O75907 488 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 SUPT20HL2P0C7V6 817 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 CNGA1P29973 690 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 GCLMP48507 274 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 SMTNP53814 917 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 FSTL1Q12841 308 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 TERF2Q15554 542 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 RIOX2Q8IUF8 465 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 ARHGEF19Q8IW93 802 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 MCPH1Q8NEM0 835 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 CNKSR2Q8WXI2 1034 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 VTI1AQ96AJ9 217 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 TMEM117Q9H0C3 514 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 KMT5AQ9NQR1 393 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 CYP26B1Q9NR63 512 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 BTBD7Q9P203 1132 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 COQ4Q9Y3A0 265 aa20.79■□□□□ 0.92
YBX3-201ENST00000228251 SYNGAP1Q96PV0 1343 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 FOXN3O00409 490 aaPredicted RBP20.78■□□□□ 0.92
YBX3-201ENST00000228251 ATP4AP20648 1035 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 EDNRBP24530 442 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 SOX10P56693 466 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 ENPEPQ07075 957 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 DMTNQ08495 405 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 PRKG1Q13976 671 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 CASP8Q14790 479 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 IFI16Q16666 785 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms