RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 BCRP11274 1271 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 PLCB3Q01970 1234 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 BHMTQ93088 406 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 SPOCK3Q9BQ16 436 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 NOVA2Q9UNW9 492 aaKnown RBP11.37□□□□□ -0.59
VPS18-201ENST00000220509 CD2APQ9Y5K6 639 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 ATRNO75882 1429 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 PVALEFA0A1B0GWK0 134 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 LRRC53A6NM62 1247 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 TCP1P17987 556 aaKnown RBP11.36□□□□□ -0.59
VPS18-201ENST00000220509 TNNI1P19237 187 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 ZNF662Q6ZS27 426 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 RTKN2Q8IZC4 609 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 ARFGAP2Q8N6H7 521 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 OSBPL10Q9BXB5 764 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 TMEM39BQ9GZU3 492 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 GLI3P10071 1580 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 SLC37A4O43826 429 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 AFPP02771 609 aaKnown RBP11.36□□□□□ -0.59
VPS18-201ENST00000220509 FAM153BP0C7A2 387 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 BDNFP23560 247 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 MDM2Q00987 491 aaPredicted RBP11.36□□□□□ -0.59
VPS18-201ENST00000220509 NSUN2Q08J23 767 aaKnown RBP eCLIP11.36□□□□□ -0.59
VPS18-201ENST00000220509 FAM153CQ494X1 144 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 TTMPQ5BVD1 217 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 WDR44Q5JSH3 913 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 CWF19L1Q69YN2 538 aaKnown RBP11.36□□□□□ -0.59
VPS18-201ENST00000220509 DDX42Q86XP3 938 aaKnown RBP eCLIP11.36□□□□□ -0.59
VPS18-201ENST00000220509 FAM167BQ9BTA0 163 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 PARVGQ9HBI0 331 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 FAM153AQ9UHL3 310 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 EXOC7Q9UPT5 735 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 ADAMTS7Q9UKP4 1686 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 PHF20L1A8MW92 1017 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 CYTH3O43739 400 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 GFPT2O94808 682 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 ASNSP08243 561 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
VPS18-201ENST00000220509 STRN3Q13033 797 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 AP3B2Q13367 1082 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 CIAPIN1Q6FI81 312 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 MCF2L2Q86YR7 1114 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 CCDC170Q8IYT3 715 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 ANKRD35Q8N283 1001 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 NACC1Q96RE7 527 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 AP1M1Q9BXS5 423 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 WDR11Q9BZH6 1224 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 GOLPH3Q9H4A6 298 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 RHBDL2Q9NX52 303 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 GCNT4Q9P109 453 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 REXO2Q9Y3B8 237 aaKnown RBP11.36□□□□□ -0.59
VPS18-201ENST00000220509 PCDHA13Q9Y5I0 950 aa11.36□□□□□ -0.59
VPS18-201ENST00000220509 NOP56O00567 594 aaKnown RBP11.35□□□□□ -0.59
VPS18-201ENST00000220509 MPHOSPH6Q99547 160 aaKnown RBP11.35□□□□□ -0.59
VPS18-201ENST00000220509 LIMA1Q9UHB6 759 aaKnown RBP11.35□□□□□ -0.59
VPS18-201ENST00000220509 CRYBG1Q9Y4K1 1723 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 OPLAHO14841 1288 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 RHOBTB3O94955 611 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 FAM117BQ6P1L5 589 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 SAMD7Q7Z3H4 446 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 MYO1HQ8N1T3 1032 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 GUF1Q8N442 669 aaKnown RBP11.35□□□□□ -0.59
VPS18-201ENST00000220509 AGBL1Q96MI9 1066 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 GABBR1Q9UBS5 961 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 WNT7AO00755 349 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 AARSP49588 968 aaKnown RBP eCLIP11.35□□□□□ -0.59
VPS18-201ENST00000220509 GFPT1Q06210 699 aaPredicted RBP11.35□□□□□ -0.59
VPS18-201ENST00000220509 DCAF15Q66K64 600 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 APOBEC3HQ6NTF7 200 aaKnown RBP11.35□□□□□ -0.59
VPS18-201ENST00000220509 GLG1Q92896 1179 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 DYDC2Q96IM9 177 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 RAVER2Q9HCJ3 691 aaKnown RBP11.35□□□□□ -0.59
VPS18-201ENST00000220509 PRM3Q9NNZ6 103 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 SNX12Q9UMY4 172 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 AHCYL1O43865 530 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 LGR5O75473 907 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 PSMC2P35998 433 aaKnown RBP11.35□□□□□ -0.59
VPS18-201ENST00000220509 AMPD2Q01433 879 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 GKAP1Q5VSY0 366 aaPredicted RBP11.35□□□□□ -0.59
VPS18-201ENST00000220509 HHIPL2Q6UWX4 724 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 GSTA5Q7RTV2 222 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 RASAL2Q9UJF2 1139 aa11.35□□□□□ -0.59
VPS18-201ENST00000220509 KCNH2Q12809 1159 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 TRADDQ15628 312 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 EEPD1Q7L9B9 569 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 GIMAP8Q8ND71 665 aaPredicted RBP11.34□□□□□ -0.59
VPS18-201ENST00000220509 MYCBPAPQ8TBZ2 947 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 EPN3Q9H201 632 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 KLHL42Q9P2K6 505 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 ABCB11O95342 1321 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 PDS5AQ29RF7 1337 aaKnown RBP11.34□□□□□ -0.59
VPS18-201ENST00000220509 BAZ2AQ9UIF9 1905 aaKnown RBP11.34□□□□□ -0.59
VPS18-201ENST00000220509 MYH2Q9UKX2 1941 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 GOLGA8IPA6NC78 632 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 GOLGA8JA6NMD2 632 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 SEL1L2Q5TEA6 688 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 EMBQ6PCB8 327 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 DNAAF5Q86Y56 855 aa11.34□□□□□ -0.59
VPS18-201ENST00000220509 PEX5LQ8IYB4 626 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms