RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 BHMT2Q9H2M3 363 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 SNX12Q9UMY4 172 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 SVILO95425 2214 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 SMNDC1O75940 238 aaKnown RBP eCLIP11.74□□□□□ -0.53
USP31-201ENST00000219689 TFAP4Q01664 338 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 PPIDQ08752 370 aaKnown RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 RSBN1Q5VWQ0 802 aaPredicted RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 FAM178BQ8IXR5 827 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 PDIK1LQ8N165 341 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 ABCC4O15439 1325 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 KYNUQ16719 465 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 NYAP1Q6ZVC0 841 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 PLEKHM3Q6ZWE6 761 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 CALN1Q9BXU9 219 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 GOLGA8CPA6NN73 597 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 NCAPG2Q86XI2 1143 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 LZTS2Q9BRK4 669 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 SYNMO15061 1565 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 DGKIO75912 1065 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 DCTN2Q13561 401 aaKnown RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 TJAP1Q5JTD0 557 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 PDZD4Q76G19 769 aaPredicted RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
USP31-201ENST00000219689 CALML6Q8TD86 181 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 PIGOQ8TEQ8 1089 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 TRIM63Q969Q1 353 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 ZFYVE9O95405 1425 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 RBBP8NLQ8NC74 664 aaPredicted RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 ADAMTS1Q9UHI8 967 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 PLXNC1O60486 1568 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 LGR5O75473 907 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 AGTP01019 485 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 KPNA2P52292 529 aaKnown RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 FAM47AQ5JRC9 791 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 TAGAPQ8N103 731 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 PRCCQ92733 491 aaPredicted RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 MTERF3Q96E29 417 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 ADAM33Q9BZ11 813 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 FOXP1Q9H334 677 aaPredicted RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 PCDHGA3Q9Y5H0 932 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 ANO9A1A5B4 782 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 OASLQ15646 514 aaKnown RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 SLC52A1Q9NWF4 448 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 TMEM120BA0PK00 339 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 SPDYE16A6NNV3 312 aaPredicted RBP11.74□□□□□ -0.53
USP31-201ENST00000219689 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 LRRC34Q8IZ02 419 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 AGBL1Q96MI9 1066 aa11.74□□□□□ -0.53
USP31-201ENST00000219689 CLEC4FQ8N1N0 589 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 MAGEF1Q9HAY2 307 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 C1orf232A0A0U1RR37 186 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 CLIC2O15247 247 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 GAS7O60861 476 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 RAPGEF3O95398 923 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 ATP11CQ8NB49 1132 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 LENG1Q96BZ8 264 aaPredicted RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 LRRC39Q96DD0 335 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 MAML3Q96JK9 1138 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 RBM12Q9NTZ6 932 aaKnown RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 DDX56Q9NY93 547 aaKnown RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 FAM47DPA6NHR8 397 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 E7ENQ6 273 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 KRT37O76014 449 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 UBOX5O94941 541 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 TJP3O95049 919 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 BYSLQ13895 437 aaKnown RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 EGFL6Q8IUX8 553 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 TRAPPC9Q96Q05 1148 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 NDUFA13Q9P0J0 144 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 RBMX2Q9Y388 322 aaKnown RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 ARHGEF12Q9NZN5 1544 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 IFRD2Q12894 506 aaPredicted RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 IYDQ6PHW0 289 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 IZUMO2Q6UXV1 221 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 REXO4Q9GZR2 422 aaKnown RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 TRIM49BA6NDI0 452 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 SEMA3EO15041 775 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 KRT16P08779 473 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 MFAP3P55082 362 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 KRR1Q13601 381 aaKnown RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 C16orf89Q6UX73 402 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 MCRS1Q96EZ8 462 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 HEMGNQ9BXL5 484 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 LAMC1P11047 1609 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 F5H423 210 aaPredicted RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 M0R2C6 588 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 EIF4A2Q14240 407 aaKnown RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 CCDC137Q6PK04 289 aaKnown RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 POTEEQ6S8J3 1075 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 MED10Q9BTT4 135 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 PCDHA12Q9UN75 941 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 MTO1Q9Y2Z2 717 aaKnown RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 SCN2AQ99250 2005 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 HMOX2P30519 316 aa11.73□□□□□ -0.53
USP31-201ENST00000219689 DMP1Q13316 513 aaPredicted RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 TAF1BQ53T94 588 aaPredicted RBP11.73□□□□□ -0.53
USP31-201ENST00000219689 PPM1NQ8N819 430 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms