RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SAAL1Q96ER3 474 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 ZCCHC11Q5TAX3 1644 aaKnown RBP20.22■□□□□ 0.83
SMPD3-201ENST00000219334 IFNA8P32881 189 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 NSUN2Q08J23 767 aaKnown RBP eCLIP20.22■□□□□ 0.83
SMPD3-201ENST00000219334 ANGEL2Q5VTE6 544 aaKnown RBP20.22■□□□□ 0.83
SMPD3-201ENST00000219334 CYP26B1Q9NR63 512 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 CCDC188H7C350 402 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 CD2BP2O95400 341 aaKnown RBP20.21■□□□□ 0.83
SMPD3-201ENST00000219334 ESRRBO95718 433 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 RSBN1LQ6PCB5 846 aaPredicted RBP20.21■□□□□ 0.83
SMPD3-201ENST00000219334 PODXLO00592 558 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 ZNF500O60304 480 aaPredicted RBP20.21■□□□□ 0.83
SMPD3-201ENST00000219334 ANKRD20A4Q4UJ75 823 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 ANKRD20A8PQ5CZ79 823 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 ANKRD20A2Q5SQ80 823 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 ANKRD20A1Q5TYW2 823 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 PGBD4Q96DM1 585 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 GPBP1L1Q9HC44 474 aaPredicted RBP20.21■□□□□ 0.83
SMPD3-201ENST00000219334 ATG16L1Q676U5 607 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 TTC19Q6DKK2 380 aaPredicted RBP20.21■□□□□ 0.83
SMPD3-201ENST00000219334 ENOSF1Q7L5Y1 443 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 FBXL13Q8NEE6 735 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 CCDC124Q96CT7 223 aaKnown RBP20.21■□□□□ 0.83
SMPD3-201ENST00000219334 G3BP2Q9UN86 482 aaKnown RBP20.21■□□□□ 0.83
SMPD3-201ENST00000219334 TDP2O95551 362 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 GGPS1O95749 300 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 STMN1P16949 149 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 ANGPTL8Q6UXH0 198 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 WHAMMQ8TF30 809 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 DDX50Q9BQ39 737 aaKnown RBP20.21■□□□□ 0.83
SMPD3-201ENST00000219334 GGA3Q9NZ52 723 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 SYNGAP1Q96PV0 1343 aa20.21■□□□□ 0.83
SMPD3-201ENST00000219334 NBPF26B4DH59 902 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 MFAP3LO75121 409 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 CLTAP09496 248 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 ART3Q13508 389 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 NBPF10Q6P3W6 841 aaKnown RBP20.2■□□□□ 0.82
SMPD3-201ENST00000219334 HAUS6Q7Z4H7 955 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 NBPF15Q8N660 670 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 SNX19Q92543 992 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 FOXO4P98177 505 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 NSUN4Q96CB9 384 aaKnown RBP20.2■□□□□ 0.82
SMPD3-201ENST00000219334 ZMYND12Q9H0C1 365 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 SUN2Q9UH99 717 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 LGALS16A8MUM7 142 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 NAALADL2Q58DX5 795 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 ZNF70Q9UC06 446 aaPredicted RBP20.2■□□□□ 0.82
SMPD3-201ENST00000219334 PLA2R1Q13018 1463 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
SMPD3-201ENST00000219334 PRKCBP05771 671 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 CYP2B6P20813 491 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 INPP1P49441 399 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 EIF3BP55884 814 aaKnown RBP20.2■□□□□ 0.82
SMPD3-201ENST00000219334 NME3Q13232 169 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 MXD4Q14582 209 aaPredicted RBP20.2■□□□□ 0.82
SMPD3-201ENST00000219334 HEMGNQ9BXL5 484 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 PCSK1NQ9UHG2 260 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 KRT7P08729 469 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 BAATQ14032 418 aaPredicted RBP20.2■□□□□ 0.82
SMPD3-201ENST00000219334 SF3B3Q15393 1217 aaKnown RBP20.2■□□□□ 0.82
SMPD3-201ENST00000219334 SMARCAD1Q9H4L7 1026 aa20.2■□□□□ 0.82
SMPD3-201ENST00000219334 TRIM49BA6NDI0 452 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 CTNND1O60716 968 aaKnown RBP20.19■□□□□ 0.82
SMPD3-201ENST00000219334 CYBBP04839 570 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 HUNKP57058 714 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 PHEXP78562 749 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 SIK2Q9H0K1 926 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 CNOT10Q9H9A5 744 aaKnown RBP20.19■□□□□ 0.82
SMPD3-201ENST00000219334 GH1P01241 217 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 NCF2P19878 526 aaPredicted RBP20.19■□□□□ 0.82
SMPD3-201ENST00000219334 SCARF1Q14162 830 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 XKR3Q5GH77 459 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 ITPRIPL1Q6GPH6 555 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 TADA2BQ86TJ2 420 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 INTS2Q9H0H0 1204 aaKnown RBP20.19■□□□□ 0.82
SMPD3-201ENST00000219334 SAYSD1Q9NPB0 183 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 ZBTB12Q9Y330 459 aaPredicted RBP20.19■□□□□ 0.82
SMPD3-201ENST00000219334 KRT38O76015 456 aa20.19■□□□□ 0.82
SMPD3-201ENST00000219334 YWHABP31946 246 aaKnown RBP20.19■□□□□ 0.82
SMPD3-201ENST00000219334 SMAP1Q8IYB5 467 aaPredicted RBP20.19■□□□□ 0.82
SMPD3-201ENST00000219334 DNAJC17Q9NVM6 304 aaKnown RBP20.19■□□□□ 0.82
SMPD3-201ENST00000219334 HSPA4LO95757 839 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 ATP1A3P13637 1013 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 DCAF4L1Q3SXM0 396 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 IER5Q5VY09 327 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 HEATR6Q6AI08 1181 aaKnown RBP20.18■□□□□ 0.82
SMPD3-201ENST00000219334 TRIM72Q6ZMU5 477 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 EXOC4Q96A65 974 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 TUFT1Q9NNX1 390 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 IP6K2Q9UHH9 426 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 WDR91A4D1P6 747 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 PPFIA2O75334 1257 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 NOP14P78316 857 aaKnown RBP20.18■□□□□ 0.82
SMPD3-201ENST00000219334 CUL1Q13616 776 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 SPATA2LQ8IUW3 424 aaPredicted RBP20.18■□□□□ 0.82
SMPD3-201ENST00000219334 TJP2Q9UDY2 1190 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 CDC27P30260 824 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 PRCPP42785 496 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 CCT5P48643 541 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 CDK17Q00537 523 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms