RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 GRAMD4Q6IC98 578 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 C16orf87Q6PH81 154 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 RBM43Q6ZSC3 357 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 METTL13Q8N6R0 699 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 EIF1ADQ8N9N8 165 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 FBXL13Q8NEE6 735 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 PSPC1Q8WXF1 523 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 PGBD1Q96JS3 809 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 NUP85Q9BW27 656 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 ECT2Q9H8V3 914 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 PKD2L1Q9P0L9 805 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 SEPT10Q9P0V9 454 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 ADGRB1O14514 1584 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 DYTNA2CJ06 578 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 PPP1R37O75864 691 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 HSPA1AP0DMV8 641 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 HSPA1BP0DMV9 641 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 KRT4P19013 534 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.7□□□□□ -1.66
CHD9-201ENST00000219084 AASDHQ4L235 1098 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 FAM133BQ5BKY9 247 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 KAZNQ674X7 775 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 SPATA4Q8NEY3 305 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 MKNK1Q9BUB5 465 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 POLR3CQ9BUI4 534 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 L2HGDHQ9H9P8 463 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 SLAIN2Q9P270 581 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 TUBE1Q9UJT0 475 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 HPCAL4Q9UM19 191 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 ERCC6L2Q5T890 1561 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 POTEFA5A3E0 1075 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 LRRC53A6NM62 1247 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 LPXNO60711 386 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 KLHL2O95198 593 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 POTEIP0CG38 1075 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 SRGNP10124 158 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 SNX1Q13596 522 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 PDE1CQ14123 709 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 POTEEQ6S8J3 1075 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 ENAHQ8N8S7 591 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 ATL2Q8NHH9 583 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 OSBP2Q969R2 916 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 C8orf37Q96NL8 207 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 RPF1Q9H9Y2 349 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 ABCF3Q9NUQ8 709 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 WDR64B1ANS9 1081 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 HAUS5O94927 633 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 ACADSP16219 412 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 IFNAR2P48551 515 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 RABL6Q3YEC7 729 aaPredicted RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 C1orf146Q5VVC0 180 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 ELMSAN1Q6PJG2 1045 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 ZNF564Q8TBZ8 553 aaPredicted RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 STAMQ92783 540 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 PBXIP1Q96AQ6 731 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 ANO3Q9BYT9 981 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 SUCLA2Q9P2R7 463 aaPredicted RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 DNAJC5BQ9UF47 199 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 USP15Q9Y4E8 981 aaPredicted RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 RHOBTB3O94955 611 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 HSPA4LO95757 839 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 CDH2P19022 906 aaPredicted RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 PRCPP42785 496 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 TMPRSS15P98073 1019 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 KLC1Q07866 573 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 KCNH2Q12809 1159 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 CRYMQ14894 314 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 HIF1AQ16665 826 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 UGP2Q16851 508 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 CCDC92Q53HC0 331 aaPredicted RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 XRRA1Q6P2D8 792 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 STAG2Q8N3U4 1231 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 TTC8Q8TAM2 541 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 DTX3LQ8TDB6 740 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 PUS7LQ9H0K6 701 aaKnown RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 PNMA3Q9UL41 463 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 RIMS1Q86UR5 1692 aaKnown RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 LOC102724428A0A0B4J2F2 783 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 ARHGEF9O43307 516 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 FTCDO95954 541 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 NPR1P16066 1061 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 PEX19P40855 299 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 FNTAP49354 379 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 SIK1P57059 783 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 CORO7P57737 925 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 BASP1P80723 227 aaKnown RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 MED21Q13503 144 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 PIGHQ14442 188 aaPredicted RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 INPP5AQ14642 412 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 KDM7AQ6ZMT4 941 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 EFL1Q7Z2Z2 1120 aaKnown RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 ERICH1Q86X53 443 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 SAMD3Q8N6K7 520 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 TRIML2Q8N7C3 387 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 TSPAN17Q96FV3 270 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 INO80BQ9C086 356 aaPredicted RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 TEKT2Q9UIF3 430 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 C16orf96A6NNT2 1141 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 TOM1L1O75674 476 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 ACSL3O95573 720 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms