RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 BHMT2Q9H2M3 363 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 UNC45AQ9H3U1 944 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 RGL1Q9NZL6 768 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 TBC1D7Q9P0N9 293 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 MRFAP1Q9Y605 127 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 ASTN2O75129 1339 aaPredicted RBP11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 IPO5O00410 1097 aaKnown RBP11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 CETN3O15182 167 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 CALUO43852 315 aaPredicted RBP11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 ARP10275 920 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 NEK3P51956 506 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 RAPGEF1Q13905 1077 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 NBPF12Q5TAG4 269 aaPredicted RBP11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 C1orf186Q6ZWK4 172 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 PLPP7Q8NBV4 271 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 EEF2KMTQ96G04 330 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 HAUS4Q9H6D7 363 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 LZTFL1Q9NQ48 299 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 AGPAT5Q9NUQ2 364 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 COL20A1Q9P218 1284 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 ODF2LQ9ULJ1 636 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 PLAGL2Q9UPG8 496 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 REXO2Q9Y3B8 237 aaKnown RBP11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 NFIBO00712 420 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 NKRFO15226 690 aaKnown RBP eCLIP11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 RGS20O76081 388 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 CNGA1P29973 690 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZNF131P52739 623 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 OAZ1P54368 228 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 CACNB1Q02641 598 aaPredicted RBP11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 MTMR2Q13614 643 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 GRAMD1BQ3KR37 738 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 XRRA1Q6P2D8 792 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 FRMD5Q7Z6J6 570 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 DDX42Q86XP3 938 aaKnown RBP eCLIP11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 TTC8Q8TAM2 541 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 SYTL5Q8TDW5 730 aaPredicted RBP11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 SAP130Q9H0E3 1048 aa11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 NUCKS1Q9H1E3 243 aaKnown RBP11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 RPAP3Q9H6T3 665 aaPredicted RBP11.59□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZBBXA8MT70 800 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 SLC16A3O15427 465 aaKnown RBP11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 FLOT1O75955 427 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 ITGB5P18084 799 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 BACE1P56817 501 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 UBXN2AP68543 259 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 NFX1Q12986 1120 aaKnown RBP11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 CTTNQ14247 550 aaKnown RBP11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 R3HDM1Q15032 1099 aaKnown RBP11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 TERF2Q15554 542 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 NOL9Q5SY16 702 aaKnown RBP11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 TMEM92Q6UXU6 159 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 NELFCDQ8IXH7 590 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 SYN2Q92777 582 aaPredicted RBP11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 EFCAB8A8MWE9 144 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 C19orf81C9J6K1 198 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 HIP1RO75146 1068 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 TADA3O75528 432 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 ALAS1P13196 640 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 GUCY2CP25092 1073 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 HOXD13P35453 343 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 CASP5P51878 434 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 HERVK_113P62684 666 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 TPH2Q8IWU9 490 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 TSEN2Q8NCE0 465 aaKnown RBP11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 ZNF280CQ8ND82 737 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 NEK11Q8NG66 645 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 NHEJ1Q9H9Q4 299 aaPredicted RBP11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 RAVER2Q9HCJ3 691 aaKnown RBP11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 AGO4Q9HCK5 861 aaKnown RBP11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 PICK1Q9NRD5 415 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 CEP72Q9P209 647 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 SSC5DA1L4H1 1573 aa11.58□□□□□ -0.56
APOBEC3D-201ENST00000216099 CAND2O75155 1236 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 FAM13AO94988 1023 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 LYPLA2O95372 231 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 LCA5LO95447 670 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 PTPRAP18433 802 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 RPL13P26373 211 aaKnown RBP11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 ADAM9Q13443 819 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 MUM1L1Q5H9M0 696 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 ZNF569Q5MCW4 686 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 MYO1HQ8N1T3 1032 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 EHBP1Q8NDI1 1231 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 MNS1Q8NEH6 495 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 BAP1Q92560 729 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 GPRC5DQ9NZD1 345 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 ADAMTS5Q9UNA0 930 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 SCAF8Q9UPN6 1271 aaKnown RBP11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 PCDHB9Q9Y5E1 797 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 DOCK5Q9H7D0 1870 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 ASTN1O14525 1302 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 A0A0U1RQJ8 604 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 CTAGE9A4FU28 777 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 RSPH10B2B2RC85 870 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 VWA5AO00534 786 aa11.57□□□□□ -0.56
APOBEC3D-201ENST00000216099 DHX15O43143 795 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms