RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SLC29A2Q14542 456 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 TMEM179Q6ZVK1 233 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 OTOP1Q7RTM1 612 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 GDAP1Q8TB36 358 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 TBC1D31Q96DN5 1066 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 ZNF277Q9NRM2 450 aaPredicted RBP16.3■□□□□ 0.2
EFNB1-201ENST00000204961 EDRF1Q3B7T1 1238 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 MCTP2Q6DN12 878 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 ZNF662Q6ZS27 426 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 CCDC121Q6ZUS5 278 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 CBWD2Q8IUF1 395 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 CCDC50Q8IVM0 306 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 LRRC57Q8N9N7 239 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 FAM212AQ96EL1 285 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 CEP89Q96ST8 783 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 VAV3Q9UKW4 847 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 CTDP1Q9Y5B0 961 aaPredicted RBP16.3■□□□□ 0.2
EFNB1-201ENST00000204961 ANKRD63C9JTQ0 380 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 CREB1P16220 341 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 PPP1R7Q15435 360 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 IFI16Q16666 785 aaKnown RBP16.29■□□□□ 0.2
EFNB1-201ENST00000204961 ACSF2Q96CM8 615 aaPredicted RBP16.29■□□□□ 0.2
EFNB1-201ENST00000204961 MTFR1LQ9H019 292 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 ISCUQ9H1K1 167 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 CCPG1Q9ULG6 757 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 hCG_1984214I3L0E3 225 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 RPS6KA5O75582 802 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 COMTP21964 271 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 CYFIP1Q7L576 1253 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 ZNF713Q8N859 430 aaPredicted RBP16.29■□□□□ 0.2
EFNB1-201ENST00000204961 CAVIN3Q969G5 261 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 BICD1Q96G01 975 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 TMOD2Q9NZR1 351 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 MMEP08473 750 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 SMARCA1P28370 1054 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 LONRF1Q17RB8 773 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 XKR9Q5GH70 373 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 HAUS1Q96CS2 278 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 NCAPGQ9BPX3 1015 aa16.29■□□□□ 0.2
EFNB1-201ENST00000204961 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.29■□□□□ 0.2
EFNB1-201ENST00000204961 MYO3BQ8WXR4 1341 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 CLDN3O15551 220 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 ECHS1P30084 290 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 PSMC4P43686 418 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 SYCP2LQ5T4T6 812 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 PNMA8AQ86V59 439 aaPredicted RBP16.28■□□□□ 0.2
EFNB1-201ENST00000204961 LDHDQ86WU2 507 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 WHAMMQ8TF30 809 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 LMBR1Q8WVP7 490 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 RAPGEF5Q92565 580 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 LRRC45Q96CN5 670 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 CYFIP2Q96F07 1278 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 CRAMP1Q96RY5 1269 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 ELAC2Q9BQ52 826 aaKnown RBP16.28■□□□□ 0.2
EFNB1-201ENST00000204961 EPN3Q9H201 632 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 TRAF3IP3Q9Y228 551 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 MYH11P35749 1972 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
EFNB1-201ENST00000204961 FERP16591 822 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 SREBF1P36956 1147 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 ITGB3BPQ13352 177 aaPredicted RBP16.28■□□□□ 0.2
EFNB1-201ENST00000204961 CEP55Q53EZ4 464 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 KAZNQ674X7 775 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 ZNF720Q7Z2F6 126 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 HAUS2Q9NVX0 235 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 CTNNAL1Q9UBT7 734 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 ASIC3Q9UHC3 531 aa16.28■□□□□ 0.2
EFNB1-201ENST00000204961 CPA5Q8WXQ8 436 aa16.27■□□□□ 0.2
EFNB1-201ENST00000204961 ZNF653Q96CK0 615 aa16.27■□□□□ 0.2
EFNB1-201ENST00000204961 TMBIM4Q9HC24 238 aa16.27■□□□□ 0.2
EFNB1-201ENST00000204961 METTL14Q9HCE5 456 aaKnown RBP16.27■□□□□ 0.2
EFNB1-201ENST00000204961 LAMB2P55268 1798 aa16.27■□□□□ 0.2
EFNB1-201ENST00000204961 ZNF394Q53GI3 561 aa16.27■□□□□ 0.2
EFNB1-201ENST00000204961 C1orf186Q6ZWK4 172 aa16.27■□□□□ 0.2
EFNB1-201ENST00000204961 DDX23Q9BUQ8 820 aaKnown RBP16.27■□□□□ 0.2
EFNB1-201ENST00000204961 ZNF341Q9BYN7 854 aa16.27■□□□□ 0.2
EFNB1-201ENST00000204961 NAV1Q8NEY1 1877 aa16.27■□□□□ 0.19
EFNB1-201ENST00000204961 PYGMP11217 842 aa16.27■□□□□ 0.19
EFNB1-201ENST00000204961 PRELPP51888 382 aa16.27■□□□□ 0.19
EFNB1-201ENST00000204961 GLE1Q53GS7 698 aaKnown RBP16.27■□□□□ 0.19
EFNB1-201ENST00000204961 SCFD2Q8WU76 684 aa16.27■□□□□ 0.19
EFNB1-201ENST00000204961 DCAF4Q8WV16 495 aa16.27■□□□□ 0.19
EFNB1-201ENST00000204961 IQCDQ96DY2 449 aa16.27■□□□□ 0.19
EFNB1-201ENST00000204961 PBKQ96KB5 322 aa16.27■□□□□ 0.19
EFNB1-201ENST00000204961 APEX2Q9UBZ4 518 aa16.27■□□□□ 0.19
EFNB1-201ENST00000204961 GOLGA6L10A0A0M3HER8 536 aa16.26■□□□□ 0.19
EFNB1-201ENST00000204961 H0YIN7 160 aa16.26■□□□□ 0.19
EFNB1-201ENST00000204961 NPR1P16066 1061 aa16.26■□□□□ 0.19
EFNB1-201ENST00000204961 MAP2K2P36507 400 aa16.26■□□□□ 0.19
EFNB1-201ENST00000204961 PCDHB18PQ96TA0 734 aa16.26■□□□□ 0.19
EFNB1-201ENST00000204961 EDEM3Q9BZQ6 932 aa16.26■□□□□ 0.19
EFNB1-201ENST00000204961 NYAP2Q9P242 653 aa16.26■□□□□ 0.19
EFNB1-201ENST00000204961 DNAH12Q6ZR08 3092 aa16.26■□□□□ 0.19
EFNB1-201ENST00000204961 GSTTP1A0A1W2PQM5 241 aa16.26■□□□□ 0.19
EFNB1-201ENST00000204961 MEFVO15553 781 aaPredicted RBP16.26■□□□□ 0.19
EFNB1-201ENST00000204961 SHOX2O60902 331 aaPredicted RBP16.26■□□□□ 0.19
EFNB1-201ENST00000204961 RPSAP08865 295 aaKnown RBP16.26■□□□□ 0.19
EFNB1-201ENST00000204961 ITGB5P18084 799 aa16.26■□□□□ 0.19
EFNB1-201ENST00000204961 BFSP1Q12934 665 aa16.26■□□□□ 0.19
EFNB1-201ENST00000204961 SPOPLQ6IQ16 392 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms