RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 HEMGNQ9BXL5 484 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 TSKSQ9UJT2 592 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 FHOD1Q9Y613 1164 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 TJP1Q07157 1748 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 ZNF18P17022 549 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 DYNLT1P63172 113 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 PRKCEQ02156 737 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 KCNB1Q14721 858 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 HP1BP3Q5SSJ5 553 aaPredicted RBP13.02□□□□□ -0.33
CHPF2-201ENST00000035307 MCTP2Q6DN12 878 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 RINT1Q6NUQ1 792 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 DDX42Q86XP3 938 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHPF2-201ENST00000035307 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.02□□□□□ -0.33
CHPF2-201ENST00000035307 POLR3FQ9H1D9 316 aaPredicted RBP13.02□□□□□ -0.33
CHPF2-201ENST00000035307 MLXIPLQ9NP71 852 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 FAM184BQ9ULE4 1060 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 CAPN6Q9Y6Q1 641 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 RPA1P27694 616 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 ADCY8P40145 1251 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 PDE6CP51160 858 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 DRAP1Q14919 205 aaPredicted RBP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 EPHA7Q15375 998 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 DENND2CQ68D51 928 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 CCDC63Q8NA47 563 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 KIAA0895Q8NCT3 520 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 MMTAG2Q9BU76 263 aaKnown RBP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 SPATC1LQ9H0A9 340 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 SEMA6BQ9H3T3 888 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 TBC1D22BQ9NU19 505 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 MORC2Q9Y6X9 1032 aaPredicted RBP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 PGRMC1O00264 195 aaKnown RBP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 MYL3P08590 195 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 STAT5BP51692 787 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 NNTQ13423 1086 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 PPP1R21Q6ZMI0 780 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 RNF149Q8NC42 400 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 SPATA4Q8NEY3 305 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 NAP1L3Q99457 506 aaPredicted RBP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 STIM2Q9P246 746 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 RGS16O15492 202 aaPredicted RBP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 USP2O75604 605 aaPredicted RBP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 EYA4O95677 639 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 DSG3P32926 999 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 PSMC5P62195 406 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 PSMD2Q13200 908 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 MTM1Q13496 603 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 EPC2Q52LR7 807 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 THOC1Q96FV9 657 aaKnown RBP13.01□□□□□ -0.33
CHPF2-201ENST00000035307 CCDC77Q9BR77 488 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 MRIQ9BWK5 157 aa13.01□□□□□ -0.33
CHPF2-201ENST00000035307 IRS2Q9Y4H2 1338 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 RNF225M0QZC1 329 aaPredicted RBP13□□□□□ -0.33
CHPF2-201ENST00000035307 ACTR2P61160 394 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 TTI2Q6NXR4 508 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 SCYL2Q6P3W7 929 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 TRIM65Q6PJ69 517 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 PPP1R14CQ8TAE6 165 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 PXMP2Q9NR77 195 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 KBTBD4Q9NVX7 518 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 PNMA3Q9UL41 463 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 PITPNM2Q9BZ72 1349 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 PDHXO00330 501 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 CTSHP09668 335 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 FERP16591 822 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 SMARCA1P28370 1054 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 PIK3CAP42336 1068 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 ZBTB16Q05516 673 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 PGM5Q15124 567 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 NT5C1BQ96P26 610 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 POP1Q99575 1024 aaKnown RBP13□□□□□ -0.33
CHPF2-201ENST00000035307 VPS37BQ9H9H4 285 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 SLC38A10Q9HBR0 1119 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 AMACRQ9UHK6 382 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 CEP290O15078 2479 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 SLX4Q8IY92 1834 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 SYNJ2BP-COX16A0A087WUM0 186 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.33
CHPF2-201ENST00000035307 KRT15P19012 456 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 KLRC1P26715 233 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 FKBP1AP62942 108 aaKnown RBP13□□□□□ -0.33
CHPF2-201ENST00000035307 KRT76Q01546 638 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 C2CD6Q53TS8 623 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 PACSIN1Q9BY11 444 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 COX16Q9P0S2 106 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 CEP72Q9P209 647 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 NOVA2Q9UNW9 492 aaKnown RBP13□□□□□ -0.33
CHPF2-201ENST00000035307 PCDHB4Q9Y5E5 795 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 CAPN7Q9Y6W3 813 aa13□□□□□ -0.33
CHPF2-201ENST00000035307 EIF3CLB5ME19 914 aaKnown RBP12.99□□□□□ -0.33
CHPF2-201ENST00000035307 ATMINO43313 823 aaPredicted RBP12.99□□□□□ -0.33
CHPF2-201ENST00000035307 SLITRK3O94933 977 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 IFT88Q13099 833 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 FAM160B1Q5W0V3 765 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 PDXDC1Q6P996 788 aa12.99□□□□□ -0.33
CHPF2-201ENST00000035307 FASTKD5Q7L8L6 764 aaKnown RBP12.99□□□□□ -0.33
CHPF2-201ENST00000035307 ACCSQ96QU6 501 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms