RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Pgrmc2Q80UU9 217 aaKnown RBP11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Bpifb6Q8BU51 449 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Slc13a4Q8BZ82 625 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 SucoQ8C341 1250 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Champ1Q8K327 802 aaKnown RBP11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Lman1lQ8VCD3 505 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gsdmdc1Q9D8T2 487 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Entpd5Q9WUZ9 427 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Fam205aA2APU8 1308 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Cntnap5cQ0V8T7 1305 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Cacna1fQ9JIS7 1985 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 DohhA0A1Y7VJ29 135 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Glt1d1A4FUP9 346 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Tada2bD3Z4Z0 420 aaKnown RBP11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ppp1r9aH3BJD6 1292 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Itgb5O70309 798 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Pkn1P70268 946 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Cep126Q0VBV7 1103 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Lmntd2Q0VET5 664 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Pbxip1Q3TVI8 727 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Rapgef1Q3UHC1 1224 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Vwa3aQ3UVV9 1148 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Znf354cQ571J5 560 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gm11437Q5QR91 290 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Cyfip2Q5SQX6 1253 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Atp13a4Q5XF90 1193 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Krt74Q6IFZ9 495 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 SrlQ7TQ48 910 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Kif2bQ8C0N1 668 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Prl7b1Q8CGZ9 251 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Eva1bQ8K2Y3 164 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Pcdhb3Q91XZ7 784 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 VillQ91YD6 859 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Fem1bQ9Z2G0 627 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gm28510A0A087WP28 240 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gm45194A0A140LJG2 572 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gm4907B1AXB9 411 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Myo1eE9Q634 1107 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Sema4dO09126 861 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Eif3dO70194 548 aaKnown RBP11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Slc16a2O70324 545 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 MyocO70624 490 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 ThbdP15306 577 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Rit2P70425 217 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Lrig2Q52KR2 1054 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 P4ha1Q60715 534 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Pacsin1Q61644 441 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Xlr3bQ6P205 226 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Slc17a8Q8BFU8 601 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Fbxo38Q8BMI0 1194 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Leng8Q8CBY3 785 aaKnown RBP11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ero1aQ8R180 464 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Slc14a1Q8VHL0 384 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Mxra8Q9DBV4 442 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Rabgef1Q9JM13 491 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Rgs17Q9QZB0 210 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Slfn14V9GXG1 899 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Tspoap1Q7TNF8 1846 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 XdhQ00519 1335 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 1700018F24RikB2RW27 314 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gm8298J3QPI0 401 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gm4758L7N258 96 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gucy1b3O54865 620 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Serpina1aP07758 413 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Serpina1bP22599 413 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Rps6P62754 249 aaKnown RBP11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Serpina1cQ00896 412 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Serpina1dQ00897 413 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Eepd1Q3TGW2 569 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 GmpsQ3THK7 693 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ogfod1Q3U0K8 545 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 XiapQ60989 496 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Nlrp4eQ66X19 978 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Exoc3Q6KAR6 755 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Rexo4Q6PAQ4 432 aaKnown RBP11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Tlr11Q6R5P0 926 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 TbataQ7TSD4 393 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Sestd1Q80UK0 696 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Atg4cQ811C2 458 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 OtoaQ8K561 1137 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 HibchQ8QZS1 385 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Spdl1Q923A2 608 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Lrrc57Q9D1G5 239 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Nsmce1Q9D720 266 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 GgcxQ9QYC7 757 aa11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Prpf40aQ9R1C7 953 aaKnown RBP11.34□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gm1141B9EJU1 475 aa11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Atp2a2O55143 1044 aaKnown RBP11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Mmp20P57748 482 aa11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Erbb2P70424 1256 aa11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Gjb6P70689 261 aa11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Rbm46P86049 533 aa11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Ccdc125Q5U465 500 aa11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Sorbs1Q62417 1290 aa11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Mapk4Q6P5G0 583 aa11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Bri3bpQ8BXV2 253 aa11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Fam20aQ8CID3 541 aa11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Matr3Q8K310 846 aaKnown RBP11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Kdm4bQ91VY5 1086 aa11.33□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Themis2Q91YX0 663 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms