RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Gfpt1P47856 697 aa33.41■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Entpd7Q3TCT4 606 aa33.41■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Oog4Q4G0C7 502 aa33.41■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Polr3gQ6NXY9 223 aa33.41■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Smarca1Q6PGB8 1046 aa33.41■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Kcnv1Q8BZN2 503 aa33.41■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 ClmnQ8C5W0 1052 aa33.41■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 SrrtQ99MR6 875 aaKnown RBP33.41■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Baiap2l1Q9DBJ3 514 aa33.41■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Wdr46Q9Z0H1 622 aaKnown RBP33.41■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Aldh2P47738 519 aaKnown RBP33.4■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Smyd5Q3TYX3 416 aa33.4■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Cyp3a11Q64459 504 aa33.4■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Wbp1lQ8BGW2 348 aa33.4■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 6820408C15RikQ8BJX2 354 aa33.4■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Matr3Q8K310 846 aaKnown RBP33.4■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Ccdc96Q9CR92 584 aa33.4■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Olig1Q9JKN5 260 aa33.4■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Ralgapa2A3KGS3 1872 aa33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Ddx23D3Z0M9 819 aaKnown RBP33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Gm4307E9PZY4 289 aa33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Gm4312K9J7E2 289 aa33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Lrrc55Q3UY51 311 aa33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Dusp11Q6NXK5 321 aaKnown RBP33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Usp37Q8C0R0 979 aa33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Tmem161bQ8C2L6 487 aa33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Tdrd7Q8K1H1 1086 aaKnown RBP33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Wdr11Q8K1X1 1223 aa33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Zfp64Q99KE8 643 aa33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Rhobtb3Q9CTN4 611 aa33.39■■■□□ 2.94
Ctdnep1-201ENSMUST00000108593 Gm13084A2A8N0 494 aa33.39■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Arhgef26D3YYY8 869 aa33.39■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Gm21973F6WEZ7 68 aa33.39■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Art2aP17981 287 aa33.39■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Trim43cP86449 446 aa33.39■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Xkr5Q5GH66 676 aa33.39■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 TbataQ7TSD4 393 aa33.39■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 PisdQ8BSF4 406 aa33.39■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Wfdc1Q9ESH5 211 aa33.39■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Cnpy2Q9QXT0 182 aa33.39■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Dnajb7Q9QYI8 312 aa33.39■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Gm45861A0A1B0GRY3 1923 aa33.38■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Syce3B5KM66 88 aa33.38■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Elac2Q80Y81 831 aaKnown RBP33.38■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Tcaf1Q8BNE1 924 aa33.38■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Gm5591Q8CDK1 855 aa33.38■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 B4galt5Q9JMK0 388 aa33.38■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Gyg1Q9R062 333 aa33.38■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Pex11aQ9Z211 246 aa33.38■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Map7d2A2AG50 781 aa33.37■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Cd37Q61470 281 aa33.37■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Kdm1aQ6ZQ88 853 aa33.37■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 March6Q6ZQ89 909 aa33.37■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Dzip3Q7TPV2 1204 aa33.37■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Crlf2Q8CII9 359 aa33.37■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Mkrn2Q9ERV1 416 aaKnown RBP33.37■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Arih2Q9Z1K6 492 aa33.37■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Nptx2O70340 429 aa33.36■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Arf4P61750 180 aa33.36■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Pstpip1P97814 415 aa33.36■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Gse1Q3U3C9 1213 aa33.36■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Ercc6lQ8BHK9 1240 aa33.36■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Ppp2r2dQ925E7 453 aa33.36■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 MutyhQ99P21 515 aa33.36■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Mcm5P49718 733 aa33.35■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Stim1P70302 685 aa33.35■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Mmrn2A6H6E2 943 aa33.35■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Ephb4P54761 987 aa33.35■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Zbtb8osQ505B7 168 aa33.35■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 E2f7Q6S7F2 904 aa33.35■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Snx10Q9CWT3 201 aa33.35■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Trim54Q9ERP3 366 aa33.35■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Cnga3Q9JJZ8 631 aa33.35■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Adam15O88839 864 aa33.34■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Cdc6O89033 562 aaKnown RBP33.34■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Adcy7P51829 1099 aa33.34■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 LxnP70202 222 aa33.34■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 PomkQ3TUA9 349 aa33.34■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 TbckQ8BM85 762 aa33.34■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Setdb2Q8C267 713 aa33.34■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Smoc2Q8CD91 447 aa33.34■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Grin3bQ91ZU9 1003 aa33.34■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 1700016D06RikQ9DAA5 166 aa33.34■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Add1Q9QYC0 735 aaKnown RBP33.34■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Lcmt1A0A0U1RNF2 332 aa33.33■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Xrcc6P23475 608 aa33.33■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 NcanP55066 1268 aa33.33■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Tyro3P55144 880 aa33.33■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 ChpfQ6IQX7 774 aa33.33■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Gtf2a2Q80ZM7 109 aa33.33■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Qsox1Q8BND5 748 aa33.33■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Sept8Q8CHH9 429 aa33.33■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Luzp1Q8R4U7 1068 aaKnown RBP33.33■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Prl2b1Q9DAZ2 228 aa33.33■■■□□ 2.93
Ctdnep1-201ENSMUST00000108593 Stx1aO35526 288 aa33.32■■■□□ 2.92
Ctdnep1-201ENSMUST00000108593 Mcm4P49717 862 aa33.32■■■□□ 2.92
Ctdnep1-201ENSMUST00000108593 Uimc1Q5U5Q9 727 aa33.32■■■□□ 2.92
Ctdnep1-201ENSMUST00000108593 Slc26a2Q62273 739 aa33.32■■■□□ 2.92
Ctdnep1-201ENSMUST00000108593 Fhod1Q6P9Q4 1197 aa33.32■■■□□ 2.92
Ctdnep1-201ENSMUST00000108593 PoliQ6R3M4 717 aa33.32■■■□□ 2.92
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms