RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Ttf2Q5NC05 1138 aa13.26□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Acad11Q80XL6 779 aa13.26□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Naa25Q8BWZ3 972 aa13.26□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Smc6Q924W5 1097 aa13.26□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Mageb16Q9CWV4 363 aa13.26□□□□□ -0.29
Vamp1-203ENSMUST00000100942 SerhlQ9EPB5 311 aa13.26□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Tmod2Q9JKK7 351 aa13.26□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Fam129cD3YZB0 591 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Cd44P15379 778 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 VimP20152 466 aaKnown RBP13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Gad1P48318 593 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Atp13a4Q5XF90 1193 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 P4ha1Q60715 534 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Ehbp1Q69ZW3 1231 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Krt9Q6RHW0 743 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Rassf6Q80UQ2 353 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Aldh5a1Q8BWF0 523 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 OtoaQ8K561 1137 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Creb3l3Q91XE9 479 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Arfgap2Q99K28 520 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Lrrc57Q9D1G5 239 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Smco2Q9DA21 347 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Usp14Q9JMA1 493 aaKnown RBP13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Cntn6Q9JMB8 1028 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Atp9aO70228 1047 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Hsd17b1P51656 344 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Cyfip2Q5SQX6 1253 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Cep104Q80V31 926 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Rtp1Q8C8C1 263 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Scyl2Q8CFE4 930 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Ccdc80Q8R2G6 949 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Pcdhb12Q91Y07 789 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Nop56Q9D6Z1 580 aaKnown RBP13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Usp21Q9QZL6 566 aa13.25□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Gm1758F6VZZ1 202 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 TazI7HJS2 263 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 UgcgO88693 394 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 PtpraP18052 829 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Gna15P30678 374 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Ctnnd1P30999 938 aaKnown RBP13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Ap1m1P35585 423 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Rbm46P86049 533 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Gas8Q60779 478 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Mapk6Q61532 720 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Git1Q68FF6 770 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 NfrkbQ6PIJ4 1296 aaKnown RBP13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Stambpl1Q76N33 436 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Lsm14bQ8CGC4 385 aaKnown RBP13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Q91Z58 1206 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Rassf3Q99P51 232 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Gm28919A0A087WP35 240 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Gm45194A0A140LJG2 572 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Klc1O88447 541 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Ift20Q61025 132 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 TbataQ7TSD4 393 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Siglec10Q80ZE3 688 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Haus1Q8BHX1 278 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Themis2Q91YX0 663 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Nfs1Q9Z1J3 459 aa13.24□□□□□ -0.29
Vamp1-203ENSMUST00000100942 1700016G14RikA0A286YCZ6 238 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 March10E9PX79 788 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Gm10436L7N1Y3 520 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Tcp1P11983 556 aaKnown RBP13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Cyp11b2P15539 500 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 PltpP55065 493 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Pfkfb2P70265 519 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Acsbg2Q2XU92 667 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Rnf207Q3V3A7 635 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 MaeaQ4VC33 396 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Lrig2Q52KR2 1054 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Cnot7Q60809 285 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Tbc1d22bQ80VE5 505 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 1700109H08RikQ9D9C0 210 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 PycardQ9EPB4 193 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Heatr4E9Q357 955 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Zfp275G3X904 499 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Gm8298J3QPI0 401 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Gm4758L7N258 96 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Fgl2P12804 432 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 GcP21614 476 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Serpinc1P32261 465 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Lrrn4P59383 733 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 ChukQ60680 745 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Pacsin1Q61644 441 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Lrrc4cQ8C031 640 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Dusp19Q8K4T5 220 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 SncbQ91ZZ3 133 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 LrmdaQ9D9B4 229 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Capn12Q9ER56 720 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Slc40a1Q9JHI9 570 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Hebp1Q9R257 190 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Scn10aQ6QIY3 1958 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Zfp408H7BX78 710 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Casp8O89110 480 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Cst8P32766 142 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Gjb6P70689 261 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Ppp1r13bQ62415 1087 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Sv2cQ69ZS6 727 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Scaf8Q6DID3 1268 aa13.23□□□□□ -0.29
Vamp1-203ENSMUST00000100942 Senp7Q8BUH8 1037 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms