RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Clcn3P51791 818 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cyth2P63034 400 aaKnown RBP9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Slc35f6Q8VE96 372 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cnot8Q9D8X5 292 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 4933406M09RikG3XA12 479 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Pgk2P09041 417 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Eno3P21550 434 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Stkld1Q80YS9 662 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gimap4Q99JY3 219 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Vmn2r78K7N6U5 853 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Nhej1Q3KNJ2 295 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Oog4Q4G0C7 502 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 AdalQ80SY6 360 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Mtrf1lQ8BJU9 373 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Trim47Q8C0E3 641 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tph2Q8CGV2 488 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Alas1Q8VC19 642 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tmprss4Q8VCA5 435 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 IrgqQ8VIM9 583 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Grin3bQ91ZU9 1003 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Flvcr1B2RXV4 560 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rgs22G3UYX5 1258 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Foxn3Q499D0 457 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Mtmr4Q91XS1 1190 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 RnmtQ9D0L8 465 aaKnown RBP9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Mfap3lQ9D3X9 409 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 2610008E11RikG3X964 669 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 FaxcQ3UMF9 409 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ppm1mQ8BU27 406 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Apopt1Q9CQW7 192 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Zbtb12Q9Z150 459 aa9.36□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rreb1Q3UH06 1700 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Vmn2r87E9PZX4 848 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 CnpP16330 420 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Lzts1P60853 599 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gja5Q01231 358 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Znf746Q3U133 652 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Pdcd11Q6NS46 1862 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Lig4Q8BTF7 911 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rasgrp1Q9Z1S3 795 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 C87977A2A958 498 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gm3127E9Q9P5 263 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gm3453K7N724 263 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gm7995L7N2E4 160 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Prl2c3P04768 224 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Fgl2P12804 432 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ctnnd1P30999 938 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Fam161bQ8CB59 589 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tmem63cQ8CBX0 802 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 AdarQ99MU3 1178 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cbx8Q9QXV1 362 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Abcb11Q9QY30 1321 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Syndig1A2ANU3 258 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Myo1eE9Q634 1107 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rgs9O54828 675 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 CcnoP0C242 352 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Sema3eP70275 775 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Uba3Q8C878 462 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Klhl11Q8CE33 709 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Btbd6Q8K2J9 488 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Csde1Q91W50 798 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Parp14Q2EMV9 1817 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gm3402K7N5P2 326 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Kcnh2O35219 1162 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rtel1Q0VGM9 1203 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Vstm4T1NXB5 319 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cep85lA0A1W2P884 806 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Kif6E9PX57 802 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Recql4Q75NR7 1216 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Dusp4Q8BFV3 398 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Sik2Q8CFH6 931 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Fbxo18Q8K2I9 1042 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Bco2Q99NF1 532 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tsc1Q9EP53 1161 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tcp1P11983 556 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gnl3Q8CI11 538 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Abcf2Q99LE6 628 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Eif4enif1Q9EST3 983 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ccdc8D3YZV8 685 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gja3Q64448 417 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rbm12b2Q66JV4 834 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tdpoz4Q6YCH2 370 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Klhl29Q80T74 875 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Haus4Q8BFT2 363 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Trim65Q8BFW4 522 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Phf23Q8BSN5 401 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Pnma1Q8C1C8 353 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Slc26a6Q8CIW6 758 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Mad2l2Q9D752 211 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Olfr1354E9Q5G9 310 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ndufs6P52503 116 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Sash1P59808 1230 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rpusd2Q149F1 553 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tigd5Q499M4 642 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 PhkbQ7TSH2 1085 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 PrameQ9D4Z5 464 aa9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Eef1gQ9D8N0 437 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 AatfQ9JKX4 526 aaKnown RBP9.35□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cfap70D3YVL2 1141 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Kpna2P52293 529 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms