RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rexo5D3YW29 759 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tmem132bF7BAB2 1078 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Sema4dO09126 861 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 MafgO54790 162 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 PltpP55065 493 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Aak1Q3UHJ0 959 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Arhgap17Q3UIA2 846 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 IqceQ6PCQ0 778 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 TbataQ7TSD4 393 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Sox30Q8CGW4 782 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Parp10Q8CIE4 960 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ago2Q8CJG0 860 aaKnown RBP10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Znrd1-asQ8R0E5 213 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Trub2Q91WG3 331 aaKnown RBP10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Rnf112Q96DY5 654 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 SarnpQ9D1J3 210 aaKnown RBP10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ddx24Q9ESV0 857 aaKnown RBP10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Vnn1Q9Z0K8 512 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Plcg1Q62077 1302 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 IkbkgO88522 412 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Lig3P97386 1015 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Runx2Q08775 607 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 DaglaQ6WQJ1 1044 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Slfnl1Q8BHW9 410 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Slc38a7Q8BWH0 463 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Cabcoco1Q8CDT7 208 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Hyou1Q9JKR6 999 aaKnown RBP10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Gm29133A0A1B0GT72 266 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Serpina3iD3Z450 408 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Mpp3O88910 568 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Dynlt1P51807 113 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Zbtb17Q60821 794 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Acot5Q6Q2Z6 421 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tdpoz2Q717B2 364 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Lig4Q8BTF7 911 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Grin3bQ91ZU9 1003 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 4930449I24RikQ9D5E3 319 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tmod3Q9JHJ0 352 aa10.99□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tubgcp6G5E8P0 1769 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Etnk2A7MCT6 385 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Gm6588E9Q3K0 461 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 P01734 135 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Drp2Q05AA6 957 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 CpQ61147 1061 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Mphosph6Q9D1Q1 161 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Map3k20Q9ESL4 802 aaKnown RBP10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Hebp1Q9R257 190 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 AtrnQ9WU60 1428 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Zfp266E9Q2S7 604 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 RetsatQ64FW2 609 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 PrcpQ7TMR0 491 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ankrd24Q80VM7 985 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Kctd3Q8BFX3 815 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Pde10aQ8CA95 790 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ces4aQ8R0W5 563 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Rfpl4bJ3QPR6 266 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 UrosP51163 265 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Irx1P81068 480 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Odr4Q4PJX1 447 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Zfp91Q62511 572 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 CcnyQ8BGU5 341 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Zhx2Q8C0C0 836 aaKnown RBP10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tmx2Q9D710 295 aaKnown RBP10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Pacsin2Q9WVE8 486 aaKnown RBP10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Prss40A6H6T1 365 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Soat2O88908 525 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Usp13Q5BKP2 858 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 PapolaQ61183 739 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Lrig3Q6P1C6 1117 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Zfp449Q8CB76 518 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Slc12a6Q924N4 1150 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Nsmce1Q9D720 266 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 IkbipQ9DBZ1 373 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Anapc7Q9WVM3 565 aa10.98□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Irf8P23611 424 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 NxnP97346 435 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Prl2c1Q5SVL9 228 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Fam160b1Q8CDM8 764 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 CacybpQ9CXW3 229 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Rgs22G3UYX5 1258 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 H2afxP27661 143 aaKnown RBP10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Mmp14P53690 582 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Irf5P56477 497 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 4933427I04RikQ3V053 235 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Sumf1Q8R0F3 372 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Reep2Q8VCD6 254 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tbc1d19Q8VDV7 526 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ugp2Q91ZJ5 508 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Q9CYI0 393 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Pramef12Q9D2F1 463 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Krt17Q9QWL7 433 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ric1Q69ZJ7 1422 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Akap5D3YVF0 745 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Gm3182K7N6T8 263 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Vgll3P85442 326 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 MlxipQ2VPU4 917 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Avpr1aQ62463 423 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Papd7Q6PB75 542 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Btbd7Q8CFE5 1130 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tph2Q8CGV2 488 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 78.8 ms