RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Usp49Q6P9L4 685 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Celf3Q8CIN6 465 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Dph5Q9CWQ0 281 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Kcng1A2BDX4 514 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Hoxa11P31311 313 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Akr1b8P45377 316 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Ccdc185Q3V118 621 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Ccdc84Q4VA36 332 aaKnown RBP8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 SkiQ60698 725 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 CtcfQ61164 736 aaKnown RBP8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Ovgp1Q62010 721 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Ano5Q75UR0 904 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Mrgprb8Q7TN51 330 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Epn1Q80VP1 575 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 SucoQ8C341 1250 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Champ1Q8K327 802 aaKnown RBP8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 TrabdQ99JY4 376 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Armc9Q9D2I5 817 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Psmg1Q9JK23 289 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Tfr2Q9JKX3 798 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Cry2Q9R194 592 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Fzd9Q9R216 592 aa8.54□□□□□ -1.04
Lig3-201ENSMUST00000021039 Supt3B0QZW4 406 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Gm9992B2RWK3 458 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Olfr552E9Q545 317 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Nr1i3O35627 358 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Myo1aO88329 1043 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Apba3O88888 571 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Rasgrf1P27671 1262 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Aimp1P31230 310 aaKnown RBP8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 GlrbP48168 496 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Nsun2Q1HFZ0 757 aaKnown RBP8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Trmt10cQ3UFY8 414 aaKnown RBP8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Kansl1lQ5DTI6 991 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Krt31Q61765 416 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Cypt2Q6P924 180 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Fez2Q6TYB5 348 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Unc93aQ710D3 458 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Lrrc8aQ80WG5 810 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Svs3bQ8BZH8 265 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Tbx22Q8K402 517 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Eps8l1Q8R5F8 716 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Kbtbd12Q9D618 625 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Vmn2r55G3UWZ4 781 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Vmn2r53L7N473 806 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Krt19P19001 403 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Ect2Q07139 913 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Tsga10Q6NY15 697 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Zfp943Q6NZP4 507 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Nsun6Q7TS68 476 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Pxylp1Q8BHA9 480 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Dennd2aQ8C4S8 1000 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Bclaf1Q8K019 919 aaKnown RBP8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Creb3l3Q91XE9 479 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Pard3bQ9CSB4 1203 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Zbed3Q9D0L1 228 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Thap2Q9D305 217 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Sesn2P58043 480 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Tubb5P99024 444 aaKnown RBP8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 NfiaQ02780 532 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Sox10Q04888 466 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Krt77Q6IFZ6 572 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Elac2Q80Y81 831 aaKnown RBP8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Pum3Q8BKS9 647 aaKnown RBP8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Grik4Q8BMF5 956 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Atp2a1Q8R429 994 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Dis3Q9CSH3 958 aaKnown RBP8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Ndufaf7Q9CWG8 436 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Pold3Q9EQ28 462 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Tbkbp1A2A9T0 611 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Speer4eK7N6S8 255 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Zhx1P70121 873 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Frat1P70339 274 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Meis2P97367 477 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Serpina1eQ00898 413 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 HmgcrQ01237 887 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Fgfr4Q03142 799 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Palb2Q3U0P1 1104 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 PRAG1Q571I4 1179 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Sorbs1Q62417 1290 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Tcaf3Q6QR59 914 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 PrcpQ7TMR0 491 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Ints4Q8CIM8 964 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Fam217aQ9D9W6 419 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Large1Q9Z1M7 756 aa8.53□□□□□ -1.04
Lig3-201ENSMUST00000021039 Slc6a16A0A1L1SR47 742 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Nlrp1bA1Z198 1177 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 DgkkE9Q7N4 1118 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Zfp408H7BX78 710 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Zfpm1O35615 995 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Slc3a2P10852 526 aaKnown RBP8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Cct6bQ61390 531 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Tdp1Q8BJ37 609 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Fam228aQ8CDW1 299 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Sept8Q8CHH9 429 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Sh2b1Q91ZM2 756 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Golga1Q9CW79 758 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Wdr64Q9D565 1086 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 PpihQ9D868 188 aa8.52□□□□□ -1.04
Lig3-201ENSMUST00000021039 Lrrc46Q9DAP0 323 aa8.52□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms