RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C ARC19P33204 171 aaKnown RBP6.43□□□□□ -1.38
UME1YPL139C MDL1P33310 695 aa6.43□□□□□ -1.38
UME1YPL139C COS9P36034 407 aa6.43□□□□□ -1.38
UME1YPL139C YKR073CP36153 106 aa6.43□□□□□ -1.38
UME1YPL139C RPP1P38786 293 aa6.43□□□□□ -1.38
UME1YPL139C YFL051CP43552 160 aa6.43□□□□□ -1.38
UME1YPL139C YJR120WP47157 116 aa6.43□□□□□ -1.38
UME1YPL139C ECL1P48235 211 aa6.43□□□□□ -1.38
UME1YPL139C SNF12P53628 566 aa6.43□□□□□ -1.38
UME1YPL139C YMR102CQ03177 834 aa6.43□□□□□ -1.38
UME1YPL139C YMR265CQ03508 461 aaKnown RBP6.43□□□□□ -1.38
UME1YPL139C COQ11Q05892 277 aa6.43□□□□□ -1.38
UME1YPL139C YDL109CQ12103 647 aa6.43□□□□□ -1.38
UME1YPL139C ADF1Q2V2Q1 113 aa6.43□□□□□ -1.38
UME1YPL139C DET1Q99288 334 aaKnown RBP6.43□□□□□ -1.38
UME1YPL139C YOL163WP0CF20 169 aa6.42□□□□□ -1.38
UME1YPL139C ITR2P30606 609 aa6.42□□□□□ -1.38
UME1YPL139C HBS1P32769 611 aaKnown RBP6.42□□□□□ -1.38
UME1YPL139C MTR2P34232 184 aaKnown RBP6.42□□□□□ -1.38
UME1YPL139C MRPL16P38064 232 aa6.42□□□□□ -1.38
UME1YPL139C RCY1P39531 840 aa6.42□□□□□ -1.38
UME1YPL139C QDR1P40475 563 aa6.42□□□□□ -1.38
UME1YPL139C NAS2P40555 220 aa6.42□□□□□ -1.38
UME1YPL139C MSY1P48527 492 aa6.42□□□□□ -1.38
UME1YPL139C TOM22P49334 152 aa6.42□□□□□ -1.38
UME1YPL139C YGR016WP53209 190 aa6.42□□□□□ -1.38
UME1YPL139C ATG38Q05789 226 aaKnown RBP6.42□□□□□ -1.38
UME1YPL139C NOP12Q08208 459 aaKnown RBP6.42□□□□□ -1.38
UME1YPL139C SFM1Q12314 213 aa6.42□□□□□ -1.38
UME1YPL139C SFG1Q12507 346 aa6.42□□□□□ -1.38
UME1YPL139C SEC16P48415 2195 aaKnown RBP6.41□□□□□ -1.38
UME1YPL139C CDC31P06704 161 aaKnown RBP6.41□□□□□ -1.38
UME1YPL139C FZO1P38297 855 aa6.41□□□□□ -1.38
UME1YPL139C YHL012WP38709 493 aa6.41□□□□□ -1.38
UME1YPL139C PEX18P38855 283 aa6.41□□□□□ -1.38
UME1YPL139C GPP1P41277 250 aaKnown RBP6.41□□□□□ -1.38
UME1YPL139C QRI7P43122 407 aa6.41□□□□□ -1.38
UME1YPL139C IRC7P43623 340 aa6.41□□□□□ -1.38
UME1YPL139C NIT2P47016 307 aa6.41□□□□□ -1.38
UME1YPL139C HMS2P47175 358 aa6.41□□□□□ -1.38
UME1YPL139C RMR1P53060 241 aa6.41□□□□□ -1.38
UME1YPL139C YNL095CP53932 642 aa6.41□□□□□ -1.38
UME1YPL139C YPL039WQ03080 316 aa6.41□□□□□ -1.38
UME1YPL139C GRE1Q08969 168 aa6.41□□□□□ -1.38
UME1YPL139C YPL225WQ08971 146 aaKnown RBP6.41□□□□□ -1.38
UME1YPL139C NFI1Q12216 726 aa6.41□□□□□ -1.38
UME1YPL139C RLM1Q12224 676 aa6.41□□□□□ -1.38
UME1YPL139C YOR343CQ12484 108 aa6.41□□□□□ -1.38
UME1YPL139C RPL24AP04449 155 aaKnown RBP6.4□□□□□ -1.39
UME1YPL139C HEM4P06174 275 aa6.4□□□□□ -1.39
UME1YPL139C MCM1P11746 286 aa6.4□□□□□ -1.39
UME1YPL139C TFS1P14306 219 aa6.4□□□□□ -1.39
UME1YPL139C PDX1P16451 410 aa6.4□□□□□ -1.39
UME1YPL139C UTR1P21373 530 aa6.4□□□□□ -1.39
UME1YPL139C KRR1P25586 316 aaPredicted RBP6.4□□□□□ -1.39
UME1YPL139C HCS1P34243 683 aa6.4□□□□□ -1.39
UME1YPL139C YKL077WP36081 392 aa6.4□□□□□ -1.39
UME1YPL139C AHP1P38013 176 aaKnown RBP6.4□□□□□ -1.39
UME1YPL139C YBR241CP38142 488 aa6.4□□□□□ -1.39
UME1YPL139C AIM3P38266 947 aaKnown RBP6.4□□□□□ -1.39
UME1YPL139C SEN34P39707 275 aa6.4□□□□□ -1.39
UME1YPL139C RBG1P39729 369 aa6.4□□□□□ -1.39
UME1YPL139C GCN20P43535 752 aaKnown RBP6.4□□□□□ -1.39
UME1YPL139C MRK1P50873 501 aa6.4□□□□□ -1.39
UME1YPL139C MKC7P53379 596 aa6.4□□□□□ -1.39
UME1YPL139C YNR062CP53748 327 aa6.4□□□□□ -1.39
UME1YPL139C YKR011CQ02209 353 aa6.4□□□□□ -1.39
UME1YPL139C DBP9Q06218 594 aaKnown RBP6.4□□□□□ -1.39
UME1YPL139C YLR126CQ12288 251 aa6.4□□□□□ -1.39
UME1YPL139C YAL064W-BO13512 126 aa6.39□□□□□ -1.39
UME1YPL139C REC107P21651 314 aa6.39□□□□□ -1.39
UME1YPL139C YCL042WP25572 119 aa6.39□□□□□ -1.39
UME1YPL139C PTP2P29461 750 aa6.39□□□□□ -1.39
UME1YPL139C NUF2P33895 451 aa6.39□□□□□ -1.39
UME1YPL139C ECM15P35195 104 aa6.39□□□□□ -1.39
UME1YPL139C YGP1P38616 354 aaKnown RBP6.39□□□□□ -1.39
UME1YPL139C ZRG8P40021 1076 aa6.39□□□□□ -1.39
UME1YPL139C PRE6P40303 254 aaKnown RBP6.39□□□□□ -1.39
UME1YPL139C ADO1P47143 340 aaKnown RBP6.39□□□□□ -1.39
UME1YPL139C YGL235WP53071 178 aa6.39□□□□□ -1.39
UME1YPL139C MPP6P53725 186 aaPredicted RBP6.39□□□□□ -1.39
UME1YPL139C TIM11P81449 96 aaPredicted RBP6.39□□□□□ -1.39
UME1YPL139C MRP51Q02950 344 aa6.39□□□□□ -1.39
UME1YPL139C SPC19Q03954 165 aa6.39□□□□□ -1.39
UME1YPL139C HFD1Q04458 532 aa6.39□□□□□ -1.39
UME1YPL139C VBA4Q04602 768 aaKnown RBP6.39□□□□□ -1.39
UME1YPL139C TDA6Q06466 467 aa6.39□□□□□ -1.39
UME1YPL139C HRT1Q08273 121 aa6.39□□□□□ -1.39
UME1YPL139C NCE102Q12207 173 aaRIP-Chip data6.39□□□□□ -1.39not detected
UME1YPL139C DBP10Q12389 995 aaKnown RBP6.39□□□□□ -1.39
UME1YPL139C YOL162WP0CF19 215 aa6.38□□□□□ -1.39
UME1YPL139C RTC2P38279 296 aa6.38□□□□□ -1.39
UME1YPL139C YHL037CP38733 133 aa6.38□□□□□ -1.39
UME1YPL139C KRE29P40026 464 aa6.38□□□□□ -1.39
UME1YPL139C BRR6P53062 197 aa6.38□□□□□ -1.39
UME1YPL139C RRN5Q02983 363 aa6.38□□□□□ -1.39
UME1YPL139C SCS7Q03529 384 aa6.38□□□□□ -1.39
UME1YPL139C RSM24Q03976 319 aa6.38□□□□□ -1.39
UME1YPL139C SEC13Q04491 297 aaKnown RBP6.38□□□□□ -1.39
UME1YPL139C TSR2Q06672 205 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 278.8 ms