RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C BTS1Q12051 335 aa7.18□□□□□ -1.26
LSP1YPL004C SET6Q12529 373 aa7.18□□□□□ -1.26
LSP1YPL004C CBP6P07253 162 aaPredicted RBP7.17□□□□□ -1.26
LSP1YPL004C TFS1P14306 219 aa7.17□□□□□ -1.26
LSP1YPL004C UTR1P21373 530 aa7.17□□□□□ -1.26
LSP1YPL004C ARC19P33204 171 aaKnown RBP7.17□□□□□ -1.26
LSP1YPL004C YKL077WP36081 392 aa7.17□□□□□ -1.26
LSP1YPL004C YKL071WP36086 256 aa7.17□□□□□ -1.26
LSP1YPL004C MGE1P38523 228 aa7.17□□□□□ -1.26
LSP1YPL004C BNA3P47039 444 aaKnown RBP7.17□□□□□ -1.26
LSP1YPL004C HMS2P47175 358 aa7.17□□□□□ -1.26
LSP1YPL004C EXG2P52911 562 aa7.17□□□□□ -1.26
LSP1YPL004C SOK2P53438 785 aaPredicted RBP7.17□□□□□ -1.26
LSP1YPL004C YNR062CP53748 327 aa7.17□□□□□ -1.26
LSP1YPL004C YNL092WP53934 400 aa7.17□□□□□ -1.26
LSP1YPL004C ASI1P54074 624 aa7.17□□□□□ -1.26
LSP1YPL004C ABZ2Q03266 374 aa7.17□□□□□ -1.26
LSP1YPL004C SCS7Q03529 384 aa7.17□□□□□ -1.26
LSP1YPL004C MRPL1Q04599 285 aa7.17□□□□□ -1.26
LSP1YPL004C HRI1Q05905 244 aaKnown RBP7.17□□□□□ -1.26
LSP1YPL004C IRC19Q07843 230 aa7.17□□□□□ -1.26
LSP1YPL004C COX17Q12287 69 aa7.17□□□□□ -1.26
LSP1YPL004C YOR343CQ12484 108 aa7.17□□□□□ -1.26
LSP1YPL004C NUP1P20676 1076 aa7.16□□□□□ -1.26
LSP1YPL004C MDH2P22133 377 aa7.16□□□□□ -1.26
LSP1YPL004C PTC6P25646 442 aa7.16□□□□□ -1.26
LSP1YPL004C RPC82P32349 654 aa7.16□□□□□ -1.26
LSP1YPL004C MAE1P36013 669 aaKnown RBP7.16□□□□□ -1.26
LSP1YPL004C NAB3P38996 802 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
LSP1YPL004C GDI1P39958 451 aaKnown RBP7.16□□□□□ -1.26
LSP1YPL004C MDE1P47095 244 aa7.16□□□□□ -1.26
LSP1YPL004C YGL101WP53144 215 aa7.16□□□□□ -1.26
LSP1YPL004C COS1P53822 381 aa7.16□□□□□ -1.26
LSP1YPL004C VBA4Q04602 768 aaKnown RBP7.16□□□□□ -1.26
LSP1YPL004C LOT6Q07923 191 aa7.16□□□□□ -1.26
LSP1YPL004C YPL191CQ08930 360 aa7.16□□□□□ -1.26
LSP1YPL004C SPC3Q12133 184 aa7.16□□□□□ -1.26
LSP1YPL004C RHO1P06780 209 aaKnown RBP7.15□□□□□ -1.26
LSP1YPL004C PEP4P07267 405 aaKnown RBP7.15□□□□□ -1.26
LSP1YPL004C RPB8P20436 146 aa7.15□□□□□ -1.26
LSP1YPL004C BUD5P25300 642 aaPredicted RBP7.15□□□□□ -1.26
LSP1YPL004C NIC96P34077 839 aa7.15□□□□□ -1.26
LSP1YPL004C LHS1P36016 881 aa7.15□□□□□ -1.26
LSP1YPL004C CHK1P38147 527 aa7.15□□□□□ -1.26
LSP1YPL004C YMR262WP38430 313 aa7.15□□□□□ -1.26
LSP1YPL004C RFC4P40339 323 aaKnown RBP7.15□□□□□ -1.26
LSP1YPL004C XBP1P40489 647 aa7.15□□□□□ -1.26
LSP1YPL004C YRB2P40517 327 aa7.15□□□□□ -1.26
LSP1YPL004C MID1P41821 548 aa7.15□□□□□ -1.26
LSP1YPL004C NIT2P47016 307 aa7.15□□□□□ -1.26
LSP1YPL004C YGR126WP53274 230 aa7.15□□□□□ -1.26
LSP1YPL004C TFB3Q03290 321 aa7.15□□□□□ -1.26
LSP1YPL004C BAG7Q12128 409 aa7.15□□□□□ -1.26
LSP1YPL004C YAL064W-BO13512 126 aa7.14□□□□□ -1.27
LSP1YPL004C CDC36P06100 191 aaPredicted RBP7.14□□□□□ -1.27
LSP1YPL004C SSA3P09435 649 aaKnown RBP7.14□□□□□ -1.27
LSP1YPL004C SNF6P18888 332 aa7.14□□□□□ -1.27
LSP1YPL004C PEP12P32854 288 aa7.14□□□□□ -1.27
LSP1YPL004C AHP1P38013 176 aaKnown RBP7.14□□□□□ -1.27
LSP1YPL004C ECM8P38246 354 aa7.14□□□□□ -1.27
LSP1YPL004C STB1P42845 420 aa7.14□□□□□ -1.27
LSP1YPL004C VMA10P48836 114 aaKnown RBP7.14□□□□□ -1.27
LSP1YPL004C HSV2P50079 448 aaPredicted RBP7.14□□□□□ -1.27
LSP1YPL004C SNF12P53628 566 aa7.14□□□□□ -1.27
LSP1YPL004C ALG12P53730 551 aa7.14□□□□□ -1.27
LSP1YPL004C YNR040WP53736 256 aa7.14□□□□□ -1.27
LSP1YPL004C COG5P53951 403 aa7.14□□□□□ -1.27
LSP1YPL004C YMR099CQ03161 297 aaKnown RBP7.14□□□□□ -1.27
LSP1YPL004C DML1Q03652 475 aa7.14□□□□□ -1.27
LSP1YPL004C PLB2Q03674 706 aa7.14□□□□□ -1.27
LSP1YPL004C SNO4Q04902 237 aa7.14□□□□□ -1.27
LSP1YPL004C RSA3Q05942 220 aaKnown RBP7.14□□□□□ -1.27
LSP1YPL004C EMG1Q06287 252 aaKnown RBP7.14□□□□□ -1.27
LSP1YPL004C YPR147CQ06522 304 aaKnown RBP7.14□□□□□ -1.27
LSP1YPL004C HSP33Q08914 237 aaKnown RBP7.14□□□□□ -1.27
LSP1YPL004C HSP32Q08992 237 aa7.14□□□□□ -1.27
LSP1YPL004C YPL119C-AQ3E751 87 aa7.14□□□□□ -1.27
LSP1YPL004C FAR1P21268 830 aa7.13□□□□□ -1.27
LSP1YPL004C PRP28P23394 588 aa7.13□□□□□ -1.27
LSP1YPL004C PRE2P30656 287 aaKnown RBP7.13□□□□□ -1.27
LSP1YPL004C KRE6P32486 720 aa7.13□□□□□ -1.27
LSP1YPL004C CYS4P32582 507 aaKnown RBP7.13□□□□□ -1.27
LSP1YPL004C SBE22P38814 852 aa7.13□□□□□ -1.27
LSP1YPL004C FET3P38993 636 aa7.13□□□□□ -1.27
LSP1YPL004C ISC1P40015 477 aaKnown RBP7.13□□□□□ -1.27
LSP1YPL004C IRC7P43623 340 aa7.13□□□□□ -1.27
LSP1YPL004C UIP4Q08926 304 aa7.13□□□□□ -1.27
LSP1YPL004C NIP7Q08962 181 aaKnown RBP7.13□□□□□ -1.27
LSP1YPL004C SIA1Q12212 622 aa7.13□□□□□ -1.27
LSP1YPL004C YDL007C-AQ2V2Q0 85 aa7.13□□□□□ -1.27
LSP1YPL004C TPK3P05986 398 aa7.12□□□□□ -1.27
LSP1YPL004C THI4P32318 326 aa7.12□□□□□ -1.27
LSP1YPL004C COS9P36034 407 aa7.12□□□□□ -1.27
LSP1YPL004C CHS7P38843 316 aa7.12□□□□□ -1.27
LSP1YPL004C RRG9P40156 214 aa7.12□□□□□ -1.27
LSP1YPL004C POP1P41812 875 aa7.12□□□□□ -1.27
LSP1YPL004C MSY1P48527 492 aa7.12□□□□□ -1.27
LSP1YPL004C SMP3Q04174 516 aa7.12□□□□□ -1.27
LSP1YPL004C ELP6Q04868 273 aa7.12□□□□□ -1.27
LSP1YPL004C YPR097WQ06839 1073 aa7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms