RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C TPC1P53257 314 aa1.64□□□□□ -2.15
SGD1YLR336C YMR111CQ04461 462 aaPredicted RBP1.64□□□□□ -2.15
SGD1YLR336C MDY2Q12285 212 aa1.64□□□□□ -2.15
SGD1YLR336C SPS100P13130 326 aa1.64□□□□□ -2.15
SGD1YLR336C YFL040WP43562 540 aa1.64□□□□□ -2.15
SGD1YLR336C VEL1P53058 206 aa1.64□□□□□ -2.15
SGD1YLR336C KTR6P54070 446 aa1.64□□□□□ -2.15
SGD1YLR336C RVB1Q03940 463 aaKnown RBP1.64□□□□□ -2.15
SGD1YLR336C YLR297WQ05899 129 aa1.64□□□□□ -2.15
SGD1YLR336C FAR10Q06001 478 aa1.64□□□□□ -2.15
SGD1YLR336C TIR4Q12218 487 aaPredicted RBP1.64□□□□□ -2.15
SGD1YLR336C RAX2Q12465 1220 aa1.64□□□□□ -2.15
SGD1YLR336C URA10P30402 227 aa1.63□□□□□ -2.15
SGD1YLR336C SHE3P38272 425 aaKnown RBP1.63□□□□□ -2.15
SGD1YLR336C END3P39013 349 aa1.63□□□□□ -2.15
SGD1YLR336C DBP6P53734 629 aaKnown RBP1.63□□□□□ -2.15
SGD1YLR336C PIN3Q06449 215 aa1.63□□□□□ -2.15
SGD1YLR336C PUT4P15380 627 aa1.63□□□□□ -2.15
SGD1YLR336C FET3P38993 636 aa1.63□□□□□ -2.15
SGD1YLR336C YFR018CP43599 363 aa1.63□□□□□ -2.15
SGD1YLR336C YDL012CQ12489 107 aa1.63□□□□□ -2.15
SGD1YLR336C TPI1P00942 248 aaKnown RBP1.62□□□□□ -2.15
SGD1YLR336C PET18P25362 215 aa1.62□□□□□ -2.15
SGD1YLR336C UTP25P40498 721 aaKnown RBP1.62□□□□□ -2.15
SGD1YLR336C HCH1P53834 153 aa1.62□□□□□ -2.15
SGD1YLR336C API2Q04413 109 aa1.62□□□□□ -2.15
SGD1YLR336C MIM1Q08176 113 aa1.62□□□□□ -2.15
SGD1YLR336C MMT2Q08970 484 aa1.62□□□□□ -2.15
SGD1YLR336C FAB1P34756 2278 aa1.62□□□□□ -2.15
SGD1YLR336C CCH1P50077 2039 aa1.62□□□□□ -2.15
SGD1YLR336C ASP3-2P0CX77 362 aa1.62□□□□□ -2.15
SGD1YLR336C ASP3-3P0CX78 362 aa1.62□□□□□ -2.15
SGD1YLR336C ASP3-4P0CX79 362 aa1.62□□□□□ -2.15
SGD1YLR336C ASP3-1P0CZ17 362 aa1.62□□□□□ -2.15
SGD1YLR336C MSS116P15424 664 aaKnown RBP1.62□□□□□ -2.15
SGD1YLR336C BGL2P15703 313 aaKnown RBP1.62□□□□□ -2.15
SGD1YLR336C TAE1P38340 232 aa1.62□□□□□ -2.15
SGD1YLR336C MNN9P39107 395 aaKnown RBP1.62□□□□□ -2.15
SGD1YLR336C FHL1P39521 936 aa1.62□□□□□ -2.15
SGD1YLR336C RRT13P40042 185 aa1.62□□□□□ -2.15
SGD1YLR336C INA22P40576 216 aa1.62□□□□□ -2.15
SGD1YLR336C YPL080CQ02826 108 aa1.62□□□□□ -2.15
SGD1YLR336C MCH1Q07376 486 aa1.62□□□□□ -2.15
SGD1YLR336C RDL2Q08742 149 aaKnown RBP1.62□□□□□ -2.15
SGD1YLR336C LDB17Q12342 491 aa1.62□□□□□ -2.15
SGD1YLR336C YAL067W-AQ8TGK6 75 aa1.62□□□□□ -2.15
SGD1YLR336C ACB1P31787 87 aa1.61□□□□□ -2.15
SGD1YLR336C SPS19P32573 292 aaKnown RBP1.61□□□□□ -2.15
SGD1YLR336C MID2P36027 376 aa1.61□□□□□ -2.15
SGD1YLR336C YKL071WP36086 256 aa1.61□□□□□ -2.15
SGD1YLR336C DBP7P36120 742 aaKnown RBP1.61□□□□□ -2.15
SGD1YLR336C RCK1P38622 512 aa1.61□□□□□ -2.15
SGD1YLR336C RRF1P38771 230 aa1.61□□□□□ -2.15
SGD1YLR336C PET8P38921 284 aa1.61□□□□□ -2.15
SGD1YLR336C VHS1Q03785 461 aa1.61□□□□□ -2.15
SGD1YLR336C YOL029CQ08187 201 aa1.61□□□□□ -2.15
SGD1YLR336C YDR018CQ12185 396 aa1.61□□□□□ -2.15
SGD1YLR336C MHP1P43638 1398 aa1.61□□□□□ -2.15
SGD1YLR336C GCD2P12754 651 aaPredicted RBP1.61□□□□□ -2.15
SGD1YLR336C EPT1P22140 391 aa1.61□□□□□ -2.15
SGD1YLR336C RBK1P25332 333 aa1.61□□□□□ -2.15
SGD1YLR336C ITR2P30606 609 aa1.61□□□□□ -2.15
SGD1YLR336C MEI5P32489 222 aa1.61□□□□□ -2.15
SGD1YLR336C CYM1P32898 989 aa1.61□□□□□ -2.15
SGD1YLR336C CBF5P33322 483 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
SGD1YLR336C MRPS9P38120 278 aa1.61□□□□□ -2.15
SGD1YLR336C GGC1P38988 300 aa1.61□□□□□ -2.15
SGD1YLR336C CDC40P40968 455 aaPredicted RBP1.61□□□□□ -2.15
SGD1YLR336C NRM1P53718 249 aa1.61□□□□□ -2.15
SGD1YLR336C RNY1Q02933 434 aaKnown RBP1.61□□□□□ -2.15
SGD1YLR336C YMR244WQ04018 355 aa1.61□□□□□ -2.15
SGD1YLR336C VAC14Q06708 880 aa1.61□□□□□ -2.15
SGD1YLR336C YLR012CQ07927 99 aa1.61□□□□□ -2.15
SGD1YLR336C YPQ1Q12010 308 aa1.61□□□□□ -2.15
SGD1YLR336C YBL111CQ3E7Y5 667 aa1.61□□□□□ -2.15
SGD1YLR336C CAR2P07991 424 aaKnown RBP1.6□□□□□ -2.15
SGD1YLR336C DBP3P20447 523 aaKnown RBP1.6□□□□□ -2.15
SGD1YLR336C RAD23P32628 398 aaKnown RBP1.6□□□□□ -2.15
SGD1YLR336C KTI12P34253 313 aaKnown RBP1.6□□□□□ -2.15
SGD1YLR336C DED81P38707 554 aaKnown RBP1.6□□□□□ -2.15
SGD1YLR336C DSE1P40077 573 aa1.6□□□□□ -2.15
SGD1YLR336C OKP1P53298 406 aa1.6□□□□□ -2.15
SGD1YLR336C IRC4Q03036 179 aa1.6□□□□□ -2.15
SGD1YLR336C MRX9Q07349 420 aaKnown RBP1.6□□□□□ -2.15
SGD1YLR336C RPN8Q08723 338 aaKnown RBP1.6□□□□□ -2.15
SGD1YLR336C APC2Q12440 853 aa1.6□□□□□ -2.15
SGD1YLR336C PRM4Q12498 284 aa1.6□□□□□ -2.15
SGD1YLR336C TIP20P33891 701 aa1.6□□□□□ -2.15
SGD1YLR336C LOC1P43586 204 aaPredicted RBP1.6□□□□□ -2.15
SGD1YLR336C PMT4P46971 762 aa1.6□□□□□ -2.15
SGD1YLR336C SED5Q01590 340 aa1.6□□□□□ -2.15
SGD1YLR336C UBX2Q04228 584 aa1.6□□□□□ -2.15
SGD1YLR336C ECM18Q04623 453 aa1.6□□□□□ -2.15
SGD1YLR336C PBP4Q07362 185 aaKnown RBP1.6□□□□□ -2.15
SGD1YLR336C YPR1Q12458 312 aa1.6□□□□□ -2.15
SGD1YLR336C FLO11P08640 1367 aa1.6□□□□□ -2.15
SGD1YLR336C CTA1P15202 515 aa1.6□□□□□ -2.15
SGD1YLR336C ECM34P38728 170 aa1.6□□□□□ -2.15
SGD1YLR336C PNC1P53184 216 aaKnown RBP1.6□□□□□ -2.15
SGD1YLR336C SAM4Q08985 325 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms