RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C PCH2P38126 564 aa2.68□□□□□ -1.98
SMD3YLR147C PEX32P38292 413 aa2.68□□□□□ -1.98
SMD3YLR147C BDH1P39714 382 aa2.68□□□□□ -1.98
SMD3YLR147C TPC1P53257 314 aa2.68□□□□□ -1.98
SMD3YLR147C RCF1Q03713 159 aa2.68□□□□□ -1.98
SMD3YLR147C YDL211CQ12121 372 aa2.68□□□□□ -1.98
SMD3YLR147C GLE1Q12315 538 aa2.68□□□□□ -1.98
SMD3YLR147C PHO84P25297 587 aaKnown RBP2.67□□□□□ -1.98
SMD3YLR147C LAS1P36146 502 aaPredicted RBP2.67□□□□□ -1.98
SMD3YLR147C MMS21P38632 267 aa2.67□□□□□ -1.98
SMD3YLR147C SPO73P40031 143 aa2.67□□□□□ -1.98
SMD3YLR147C RRG9P40156 214 aa2.67□□□□□ -1.98
SMD3YLR147C YMR134WP40207 237 aa2.67□□□□□ -1.98
SMD3YLR147C ECM19Q06011 112 aa2.67□□□□□ -1.98
SMD3YLR147C DBP9Q06218 594 aaKnown RBP2.67□□□□□ -1.98
SMD3YLR147C HXT2P23585 541 aa2.66□□□□□ -1.98
SMD3YLR147C POT1P27796 417 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
SMD3YLR147C CBF5P33322 483 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
SMD3YLR147C IML3P38265 245 aa2.66□□□□□ -1.98
SMD3YLR147C NRM1P53718 249 aa2.66□□□□□ -1.98
SMD3YLR147C UTP15Q04305 513 aaKnown RBP2.66□□□□□ -1.98
SMD3YLR147C NFI1Q12216 726 aa2.66□□□□□ -1.98
SMD3YLR147C VPS63O13549 108 aa2.65□□□□□ -1.99
SMD3YLR147C RPB9P27999 122 aa2.65□□□□□ -1.99
SMD3YLR147C YMR262WP38430 313 aa2.65□□□□□ -1.99
SMD3YLR147C SMD1Q02260 146 aaPredicted RBP2.65□□□□□ -1.99
SMD3YLR147C INP1Q03694 420 aa2.65□□□□□ -1.99
SMD3YLR147C YMR244WQ04018 355 aa2.65□□□□□ -1.99
SMD3YLR147C SPH1Q06160 661 aa2.65□□□□□ -1.99
SMD3YLR147C ARR1Q06596 294 aa2.65□□□□□ -1.99
SMD3YLR147C NBL1Q3E7Y6 73 aa2.65□□□□□ -1.99
SMD3YLR147C DCC1P25559 380 aa2.64□□□□□ -1.99
SMD3YLR147C ZRT3P34240 503 aa2.64□□□□□ -1.99
SMD3YLR147C AQR1P53943 586 aa2.64□□□□□ -1.99
SMD3YLR147C RRB1Q04225 511 aaKnown RBP2.64□□□□□ -1.99
SMD3YLR147C DFM1Q12743 341 aaKnown RBP2.64□□□□□ -1.99
SMD3YLR147C CUP2P15315 225 aa2.63□□□□□ -1.99
SMD3YLR147C CPT1P17898 393 aa2.63□□□□□ -1.99
SMD3YLR147C CIN8P27895 1000 aa2.63□□□□□ -1.99
SMD3YLR147C SIF2P38262 535 aa2.63□□□□□ -1.99
SMD3YLR147C ALP1P38971 573 aa2.63□□□□□ -1.99
SMD3YLR147C YIL089WP40500 205 aa2.63□□□□□ -1.99
SMD3YLR147C YIL059CP40520 121 aa2.63□□□□□ -1.99
SMD3YLR147C DIA1P54005 336 aa2.63□□□□□ -1.99
SMD3YLR147C VTI1Q04338 217 aa2.63□□□□□ -1.99
SMD3YLR147C GMC1Q04399 608 aa2.63□□□□□ -1.99
SMD3YLR147C DIB1Q06819 143 aaPredicted RBP2.63□□□□□ -1.99
SMD3YLR147C REP1P03871 373 aa2.62□□□□□ -1.99
SMD3YLR147C RCK1P38622 512 aa2.62□□□□□ -1.99
SMD3YLR147C SMF2P38778 549 aa2.62□□□□□ -1.99
SMD3YLR147C CUE3P53137 624 aaKnown RBP2.62□□□□□ -1.99
SMD3YLR147C MHP1P43638 1398 aa2.61□□□□□ -1.99
SMD3YLR147C YLL053CP0CD98 152 aa2.61□□□□□ -1.99
SMD3YLR147C CTA1P15202 515 aa2.61□□□□□ -1.99
SMD3YLR147C MYO3P36006 1272 aa2.61□□□□□ -1.99
SMD3YLR147C RFT1P38206 574 aaPredicted RBP2.61□□□□□ -1.99
SMD3YLR147C PMT4P46971 762 aa2.61□□□□□ -1.99
SMD3YLR147C SDS23P53172 527 aa2.61□□□□□ -1.99
SMD3YLR147C FMP48P53233 369 aa2.61□□□□□ -1.99
SMD3YLR147C PML1Q07930 204 aaPredicted RBP2.61□□□□□ -1.99
SMD3YLR147C MIM1Q08176 113 aa2.61□□□□□ -1.99
SMD3YLR147C HRT1Q08273 121 aa2.61□□□□□ -1.99
SMD3YLR147C RPS23AP0CX29 145 aaKnown RBP2.6□□□□□ -1.99
SMD3YLR147C RPS23BP0CX30 145 aa2.6□□□□□ -1.99
SMD3YLR147C YKL187CP34231 750 aa2.6□□□□□ -1.99
SMD3YLR147C PRP39P39682 629 aaKnown RBP2.6□□□□□ -1.99
SMD3YLR147C DSE1P40077 573 aa2.6□□□□□ -1.99
SMD3YLR147C BTT1P40314 149 aaPredicted RBP2.6□□□□□ -1.99
SMD3YLR147C MIC19P43594 170 aa2.6□□□□□ -1.99
SMD3YLR147C PRP46Q12417 451 aaPredicted RBP2.6□□□□□ -1.99
SMD3YLR147C SPO24Q3E752 67 aa2.6□□□□□ -1.99
SMD3YLR147C TAL1P15019 335 aaKnown RBP2.59□□□□□ -1.99
SMD3YLR147C HIT1P46973 164 aa2.59□□□□□ -1.99
SMD3YLR147C YJL144WP47009 104 aa2.59□□□□□ -1.99
SMD3YLR147C PXR1P53335 271 aaPredicted RBP2.59□□□□□ -1.99
SMD3YLR147C HCH1P53834 153 aa2.59□□□□□ -1.99
SMD3YLR147C RGS2Q99188 309 aa2.59□□□□□ -1.99
SMD3YLR147C SPS100P13130 326 aa2.58□□□□□ -2
SMD3YLR147C BUD2P33314 1104 aa2.58□□□□□ -2
SMD3YLR147C KTI12P34253 313 aaKnown RBP2.58□□□□□ -2
SMD3YLR147C APE4P38821 490 aa2.58□□□□□ -2
SMD3YLR147C MRX9Q07349 420 aaKnown RBP2.58□□□□□ -2
SMD3YLR147C RDL2Q08742 149 aaKnown RBP2.58□□□□□ -2
SMD3YLR147C PSY3Q12318 242 aa2.58□□□□□ -2
SMD3YLR147C DAL5P15365 543 aa2.57□□□□□ -2
SMD3YLR147C ASG7P46993 209 aa2.57□□□□□ -2
SMD3YLR147C TAF6P53040 516 aa2.57□□□□□ -2
SMD3YLR147C YGL114WP53134 725 aa2.57□□□□□ -2
SMD3YLR147C PDR16P53860 351 aaKnown RBP2.57□□□□□ -2
SMD3YLR147C GTO3Q04806 366 aa2.57□□□□□ -2
SMD3YLR147C YPL264CQ08980 353 aa2.57□□□□□ -2
SMD3YLR147C PRM4Q12498 284 aa2.57□□□□□ -2
SMD3YLR147C YEL043WP32618 956 aa2.56□□□□□ -2
SMD3YLR147C ECM14P38836 430 aa2.56□□□□□ -2
SMD3YLR147C SLM1P40485 686 aa2.56□□□□□ -2
SMD3YLR147C NAS2P40555 220 aa2.56□□□□□ -2
SMD3YLR147C CAX4P53223 239 aa2.56□□□□□ -2
SMD3YLR147C YNL146WP53906 100 aa2.56□□□□□ -2
SMD3YLR147C ACT1P60010 375 aaKnown RBP2.56□□□□□ -2
SMD3YLR147C YDR262WQ12331 272 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms