RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C KRE6P32486 720 aa9.14□□□□□ -0.95
SHB17YKR043C YME2P32843 850 aa9.14□□□□□ -0.95
SHB17YKR043C GPX1P36014 167 aa9.14□□□□□ -0.95
SHB17YKR043C YKL077WP36081 392 aa9.14□□□□□ -0.95
SHB17YKR043C RPP1P38786 293 aa9.14□□□□□ -0.95
SHB17YKR043C NIT2P47016 307 aa9.14□□□□□ -0.95
SHB17YKR043C HMS2P47175 358 aa9.14□□□□□ -0.95
SHB17YKR043C SNF12P53628 566 aa9.14□□□□□ -0.95
SHB17YKR043C SPO19Q03029 223 aa9.14□□□□□ -0.95
SHB17YKR043C DML1Q03652 475 aa9.14□□□□□ -0.95
SHB17YKR043C PLB2Q03674 706 aa9.14□□□□□ -0.95
SHB17YKR043C SNT309Q06091 175 aaPredicted RBP9.14□□□□□ -0.95
SHB17YKR043C LOT6Q07923 191 aa9.14□□□□□ -0.95
SHB17YKR043C SPC3Q12133 184 aa9.14□□□□□ -0.95
SHB17YKR043C RIB3Q99258 208 aa9.14□□□□□ -0.95
SHB17YKR043C SSA3P09435 649 aaKnown RBP9.13□□□□□ -0.95
SHB17YKR043C ATR1P13090 542 aa9.13□□□□□ -0.95
SHB17YKR043C HAP4P14064 554 aa9.13□□□□□ -0.95
SHB17YKR043C RPB8P20436 146 aa9.13□□□□□ -0.95
SHB17YKR043C PRP28P23394 588 aa9.13□□□□□ -0.95
SHB17YKR043C PRP19P32523 503 aaKnown RBP9.13□□□□□ -0.95
SHB17YKR043C PEP12P32854 288 aa9.13□□□□□ -0.95
SHB17YKR043C AHP1P38013 176 aaKnown RBP9.13□□□□□ -0.95
SHB17YKR043C CHS7P38843 316 aa9.13□□□□□ -0.95
SHB17YKR043C RFC4P40339 323 aaKnown RBP9.13□□□□□ -0.95
SHB17YKR043C CHA4P43634 648 aa9.13□□□□□ -0.95
SHB17YKR043C YJR098CP47139 656 aa9.13□□□□□ -0.95
SHB17YKR043C LYS5P50113 272 aa9.13□□□□□ -0.95
SHB17YKR043C SOK2P53438 785 aaPredicted RBP9.13□□□□□ -0.95
SHB17YKR043C ALG12P53730 551 aa9.13□□□□□ -0.95
SHB17YKR043C YNR040WP53736 256 aa9.13□□□□□ -0.95
SHB17YKR043C ASI1P54074 624 aa9.13□□□□□ -0.95
SHB17YKR043C ABZ2Q03266 374 aa9.13□□□□□ -0.95
SHB17YKR043C YOR343CQ12484 108 aa9.13□□□□□ -0.95
SHB17YKR043C YAL064W-BO13512 126 aa9.12□□□□□ -0.95
SHB17YKR043C BUD5P25300 642 aaPredicted RBP9.12□□□□□ -0.95
SHB17YKR043C YKL071WP36086 256 aa9.12□□□□□ -0.95
SHB17YKR043C YMR262WP38430 313 aa9.12□□□□□ -0.95
SHB17YKR043C IRC7P43623 340 aa9.12□□□□□ -0.95
SHB17YKR043C COS1P53822 381 aa9.12□□□□□ -0.95
SHB17YKR043C SCS7Q03529 384 aa9.12□□□□□ -0.95
SHB17YKR043C VBA4Q04602 768 aaKnown RBP9.12□□□□□ -0.95
SHB17YKR043C SNO4Q04902 237 aa9.12□□□□□ -0.95
SHB17YKR043C MEU1Q07938 337 aaKnown RBP RIP-Chip data9.12□□□□□ -0.95not detected
SHB17YKR043C HSP33Q08914 237 aaKnown RBP9.12□□□□□ -0.95
SHB17YKR043C HSP32Q08992 237 aa9.12□□□□□ -0.95
SHB17YKR043C TAF3Q12297 353 aa9.12□□□□□ -0.95
SHB17YKR043C SET6Q12529 373 aa9.12□□□□□ -0.95
SHB17YKR043C RHO1P06780 209 aaKnown RBP9.11□□□□□ -0.95
SHB17YKR043C PEP4P07267 405 aaKnown RBP9.11□□□□□ -0.95
SHB17YKR043C DPM1P14020 267 aaKnown RBP9.11□□□□□ -0.95
SHB17YKR043C SNF6P18888 332 aa9.11□□□□□ -0.95
SHB17YKR043C MAK32P23060 363 aa9.11□□□□□ -0.95
SHB17YKR043C PRE2P30656 287 aaKnown RBP9.11□□□□□ -0.95
SHB17YKR043C MSN4P33749 630 aa9.11□□□□□ -0.95
SHB17YKR043C NIC96P34077 839 aa9.11□□□□□ -0.95
SHB17YKR043C COS9P36034 407 aa9.11□□□□□ -0.95
SHB17YKR043C FET3P38993 636 aa9.11□□□□□ -0.95
SHB17YKR043C NAB3P38996 802 aaKnown RBP RIP-Chip data9.11□□□□□ -0.95not detected
SHB17YKR043C MRPL1Q04599 285 aa9.11□□□□□ -0.95
SHB17YKR043C WTM2Q12206 467 aa9.11□□□□□ -0.95
SHB17YKR043C MAE1P36013 669 aaKnown RBP9.1□□□□□ -0.95
SHB17YKR043C PTH1P38876 190 aaKnown RBP9.1□□□□□ -0.95
SHB17YKR043C GDI1P39958 451 aaKnown RBP9.1□□□□□ -0.95
SHB17YKR043C KRE29P40026 464 aa9.1□□□□□ -0.95
SHB17YKR043C YRB2P40517 327 aa9.1□□□□□ -0.95
SHB17YKR043C RPS0BP46654 252 aaKnown RBP9.1□□□□□ -0.95
SHB17YKR043C IDS2P46958 469 aa9.1□□□□□ -0.95
SHB17YKR043C EXG2P52911 562 aa9.1□□□□□ -0.95
SHB17YKR043C YPR147CQ06522 304 aaKnown RBP9.1□□□□□ -0.95
SHB17YKR043C HRT1Q08273 121 aa9.1□□□□□ -0.95
SHB17YKR043C UIP4Q08926 304 aa9.1□□□□□ -0.95
SHB17YKR043C YDL007C-AQ2V2Q0 85 aa9.1□□□□□ -0.95
SHB17YKR043C TFS1P14306 219 aa9.09□□□□□ -0.95
SHB17YKR043C MRPL16P38064 232 aa9.09□□□□□ -0.95
SHB17YKR043C CHK1P38147 527 aa9.09□□□□□ -0.95
SHB17YKR043C RTC2P38279 296 aa9.09□□□□□ -0.95
SHB17YKR043C SBE22P38814 852 aa9.09□□□□□ -0.95
SHB17YKR043C RRG9P40156 214 aa9.09□□□□□ -0.95
SHB17YKR043C GVP36P40531 326 aaKnown RBP9.09□□□□□ -0.95
SHB17YKR043C QRI7P43122 407 aa9.09□□□□□ -0.95
SHB17YKR043C MDE1P47095 244 aa9.09□□□□□ -0.95
SHB17YKR043C MSY1P48527 492 aa9.09□□□□□ -0.95
SHB17YKR043C YGL101WP53144 215 aa9.09□□□□□ -0.95
SHB17YKR043C SMP3Q04174 516 aa9.09□□□□□ -0.95
SHB17YKR043C EMG1Q06287 252 aaKnown RBP9.09□□□□□ -0.95
SHB17YKR043C YDL176WQ12027 708 aa9.09□□□□□ -0.95
SHB17YKR043C ECM8P38246 354 aa9.08□□□□□ -0.96
SHB17YKR043C NAS2P40555 220 aa9.08□□□□□ -0.96
SHB17YKR043C STB1P42845 420 aa9.08□□□□□ -0.96
SHB17YKR043C BRR6P53062 197 aa9.08□□□□□ -0.96
SHB17YKR043C TFB3Q03290 321 aa9.08□□□□□ -0.96
SHB17YKR043C ELP6Q04868 273 aa9.08□□□□□ -0.96
SHB17YKR043C CRR1Q05790 422 aa9.08□□□□□ -0.96
SHB17YKR043C YPR097WQ06839 1073 aa9.08□□□□□ -0.96
SHB17YKR043C NIP7Q08962 181 aaKnown RBP9.08□□□□□ -0.96
SHB17YKR043C TPK3P05986 398 aa9.07□□□□□ -0.96
SHB17YKR043C MCM1P11746 286 aa9.07□□□□□ -0.96
SHB17YKR043C MDH3P32419 343 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
SHB17YKR043C CYS4P32582 507 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms