RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDE1	YGL248W	Q0144	Q9ZZW2	109 aa		4.89	□□□□□ -1.63
PDE1	YGL248W	RPL28	P02406	149 aa	Known RBP	4.88	□□□□□ -1.63
PDE1	YGL248W	KIN28	P06242	306 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	DST1	P07273	309 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	COS2	P0CX12	379 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	COS3	P0CX13	379 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	RPL12A	P0CX53	165 aa	Known RBP	4.88	□□□□□ -1.63
PDE1	YGL248W	RPL12B	P0CX54	165 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	AMD2	P22580	549 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	AAT2	P23542	418 aa	Known RBP	4.88	□□□□□ -1.63
PDE1	YGL248W	HSP30	P25619	332 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	CNE1	P27825	502 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	LAC1	P28496	418 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	EHD3	P28817	500 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
PDE1	YGL248W	CDC5	P32562	705 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	BCS1	P32839	456 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	BDH1	P39714	382 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	LAS21	P40367	830 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	YGR210C	P42942	411 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	QRI1	P43123	477 aa	Known RBP	4.88	□□□□□ -1.63
PDE1	YGL248W	YJL016W	P47072	561 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	MIC26	P50087	233 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	VEL1	P53058	206 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	SHY1	P53266	389 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	ABF2	Q02486	183 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	YMD8	Q03697	442 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	ASR1	Q06834	288 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	AKR2	Q12013	749 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	FCY22	Q12119	530 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	DCN1	Q12395	269 aa		4.88	□□□□□ -1.63
PDE1	YGL248W	RPO41	P13433	1351 aa	Known RBP	4.88	□□□□□ -1.63
PDE1	YGL248W	OPI3	P05375	206 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	RPL4A	P10664	362 aa	Known RBP	4.87	□□□□□ -1.63
PDE1	YGL248W	ARF1	P11076	181 aa	Known RBP	4.87	□□□□□ -1.63
PDE1	YGL248W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PDE1	YGL248W	AMD1	P15274	810 aa	Known RBP	4.87	□□□□□ -1.63
PDE1	YGL248W	CPT1	P17898	393 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	CDC10	P25342	322 aa	Known RBP	4.87	□□□□□ -1.63
PDE1	YGL248W	STE14	P32584	239 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	PPZ2	P33329	710 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	MRPS5	P33759	307 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	TCM62	P38228	572 aa	Known RBP	4.87	□□□□□ -1.63
PDE1	YGL248W	STP2	P38704	541 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	SAS2	P40963	338 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	YFR020W	P43600	232 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	ADO1	P47143	340 aa	Known RBP	4.87	□□□□□ -1.63
PDE1	YGL248W	RPL4B	P49626	362 aa	Known RBP	4.87	□□□□□ -1.63
PDE1	YGL248W	USE1	P53146	245 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	OKP1	P53298	406 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	YNR066C	P53752	436 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	KIN4	Q01919	800 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	SNX41	Q04053	625 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	NAT4	Q04751	285 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	DTD1	Q07648	150 aa	Known RBP	4.87	□□□□□ -1.63
PDE1	YGL248W	LDS2	Q08218	356 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	ALE1	Q08548	619 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	TAF2	P23255	1407 aa		4.87	□□□□□ -1.63
PDE1	YGL248W	ILV1	P00927	576 aa	Known RBP	4.86	□□□□□ -1.63
PDE1	YGL248W	PEP4	P07267	405 aa	Known RBP	4.86	□□□□□ -1.63
PDE1	YGL248W	CHO1	P08456	276 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	IDP1	P21954	428 aa	Known RBP	4.86	□□□□□ -1.63
PDE1	YGL248W	KAR9	P32526	644 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	SGE1	P33335	543 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	SHO1	P40073	367 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	RTS2	P40962	232 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	TMA20	P89886	181 aa	Predicted RBP	4.86	□□□□□ -1.63
PDE1	YGL248W	TIM44	Q01852	431 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	DYN2	Q02647	92 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	YPL077C	Q02831	240 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	HSP31	Q04432	237 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	TMN2	Q04562	672 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	RGC1	Q06108	1083 aa	Known RBP	4.86	□□□□□ -1.63
PDE1	YGL248W	WHI4	Q07655	649 aa	Known RBP	4.86	□□□□□ -1.63
PDE1	YGL248W	YDL242W	Q07746	117 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	YLR031W	Q07978	186 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	THP1	Q08231	455 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	WIP1	Q2V2P8	89 aa		4.86	□□□□□ -1.63
PDE1	YGL248W	TOP2	P06786	1428 aa	Known RBP	4.86	□□□□□ -1.63
PDE1	YGL248W	SPT3	P06844	337 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	KIN3	P22209	435 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	MRPL6	P32904	214 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	BNA4	P38169	460 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	RCK2	P38623	610 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	DHH1	P39517	506 aa	Known RBP	4.85	□□□□□ -1.63
PDE1	YGL248W	BDH2	P39713	417 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	URM1	P40554	99 aa	Predicted RBP	4.85	□□□□□ -1.63
PDE1	YGL248W	PMT6	P42934	759 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	ASG7	P46993	209 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	PHB2	P50085	310 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	PMT5	P52867	743 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	NBP35	P52920	328 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	CPD1	P53314	239 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	COG5	P53951	403 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	RSM23	Q01163	450 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	YPL080C	Q02826	108 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	DIG1	Q03063	452 aa	Known RBP	4.85	□□□□□ -1.63
PDE1	YGL248W	MSS11	Q03825	758 aa		4.85	□□□□□ -1.63
PDE1	YGL248W	HCR1	Q05775	265 aa	Known RBP	4.85	□□□□□ -1.63
PDE1	YGL248W	ARC18	Q05933	178 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms