RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C MDY2Q12285 212 aa3.59□□□□□ -1.83
SCL1YGL011C URA10P30402 227 aa3.58□□□□□ -1.84
SCL1YGL011C VMA5P31412 392 aaKnown RBP3.58□□□□□ -1.84
SCL1YGL011C MRPS9P38120 278 aa3.58□□□□□ -1.84
SCL1YGL011C DTR1P38125 572 aa3.58□□□□□ -1.84
SCL1YGL011C SHE3P38272 425 aaKnown RBP3.58□□□□□ -1.84
SCL1YGL011C SWC5P38326 303 aa3.58□□□□□ -1.84
SCL1YGL011C END3P39013 349 aa3.58□□□□□ -1.84
SCL1YGL011C MMT2Q08970 484 aa3.58□□□□□ -1.84
SCL1YGL011C LDB17Q12342 491 aa3.58□□□□□ -1.84
SCL1YGL011C SPS100P13130 326 aa3.57□□□□□ -1.84
SCL1YGL011C RBK1P25332 333 aa3.57□□□□□ -1.84
SCL1YGL011C PET18P25362 215 aa3.57□□□□□ -1.84
SCL1YGL011C BUD2P33314 1104 aa3.57□□□□□ -1.84
SCL1YGL011C YKL162CP36052 402 aa3.57□□□□□ -1.84
SCL1YGL011C YKL071WP36086 256 aa3.57□□□□□ -1.84
SCL1YGL011C HCH1P53834 153 aa3.57□□□□□ -1.84
SCL1YGL011C TIR4Q12218 487 aaPredicted RBP3.57□□□□□ -1.84
SCL1YGL011C REP1P03871 373 aa3.56□□□□□ -1.84
SCL1YGL011C PUT4P15380 627 aa3.56□□□□□ -1.84
SCL1YGL011C BGL2P15703 313 aaKnown RBP3.56□□□□□ -1.84
SCL1YGL011C EPT1P22140 391 aa3.56□□□□□ -1.84
SCL1YGL011C MID2P36027 376 aa3.56□□□□□ -1.84
SCL1YGL011C YFR018CP43599 363 aa3.56□□□□□ -1.84
SCL1YGL011C TPC1P53257 314 aa3.56□□□□□ -1.84
SCL1YGL011C NRM1P53718 249 aa3.56□□□□□ -1.84
SCL1YGL011C FAR10Q06001 478 aa3.56□□□□□ -1.84
SCL1YGL011C APC2Q12440 853 aa3.56□□□□□ -1.84
SCL1YGL011C RAX2Q12465 1220 aa3.56□□□□□ -1.84
SCL1YGL011C MEI5P32489 222 aa3.55□□□□□ -1.84
SCL1YGL011C RRT13P40042 185 aa3.55□□□□□ -1.84
SCL1YGL011C UTP25P40498 721 aaKnown RBP3.55□□□□□ -1.84
SCL1YGL011C INA22P40576 216 aa3.55□□□□□ -1.84
SCL1YGL011C RIB4P50861 169 aaPredicted RBP3.55□□□□□ -1.84
SCL1YGL011C DBP6P53734 629 aaKnown RBP3.55□□□□□ -1.84
SCL1YGL011C API2Q04413 109 aa3.55□□□□□ -1.84
SCL1YGL011C YMR111CQ04461 462 aaPredicted RBP3.55□□□□□ -1.84
SCL1YGL011C CUR1Q06469 252 aa3.55□□□□□ -1.84
SCL1YGL011C RPN8Q08723 338 aaKnown RBP3.55□□□□□ -1.84
SCL1YGL011C YPQ1Q12010 308 aa3.55□□□□□ -1.84
SCL1YGL011C PAA1Q12447 191 aaKnown RBP3.55□□□□□ -1.84
SCL1YGL011C YOL085CQ99345 113 aa3.55□□□□□ -1.84
SCL1YGL011C GCD2P12754 651 aaPredicted RBP3.54□□□□□ -1.84
SCL1YGL011C ACB1P31787 87 aa3.54□□□□□ -1.84
SCL1YGL011C SPS19P32573 292 aaKnown RBP3.54□□□□□ -1.84
SCL1YGL011C GGC1P38988 300 aa3.54□□□□□ -1.84
SCL1YGL011C FET3P38993 636 aa3.54□□□□□ -1.84
SCL1YGL011C PIN3Q06449 215 aa3.54□□□□□ -1.84
SCL1YGL011C RDL2Q08742 149 aaKnown RBP3.54□□□□□ -1.84
SCL1YGL011C MHP1P43638 1398 aa3.53□□□□□ -1.84
SCL1YGL011C TPI1P00942 248 aaKnown RBP3.53□□□□□ -1.84
SCL1YGL011C ITR2P30606 609 aa3.53□□□□□ -1.84
SCL1YGL011C ECM34P38728 170 aa3.53□□□□□ -1.84
SCL1YGL011C FHL1P39521 936 aa3.53□□□□□ -1.84
SCL1YGL011C YFL040WP43562 540 aa3.53□□□□□ -1.84
SCL1YGL011C YPL080CQ02826 108 aa3.53□□□□□ -1.84
SCL1YGL011C YDL012CQ12489 107 aa3.53□□□□□ -1.84
SCL1YGL011C YAL067W-AQ8TGK6 75 aa3.53□□□□□ -1.84
SCL1YGL011C CTA1P15202 515 aa3.52□□□□□ -1.85
SCL1YGL011C MSS116P15424 664 aaKnown RBP3.52□□□□□ -1.85
SCL1YGL011C CBF5P33322 483 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
SCL1YGL011C KTI12P34253 313 aaKnown RBP3.52□□□□□ -1.85
SCL1YGL011C TAE1P38340 232 aa3.52□□□□□ -1.85
SCL1YGL011C DED81P38707 554 aaKnown RBP3.52□□□□□ -1.85
SCL1YGL011C MNN9P39107 395 aaKnown RBP3.52□□□□□ -1.85
SCL1YGL011C SED5Q01590 340 aa3.52□□□□□ -1.85
SCL1YGL011C ECM11Q04110 302 aa3.52□□□□□ -1.85
SCL1YGL011C YLR012CQ07927 99 aa3.52□□□□□ -1.85
SCL1YGL011C YOL029CQ08187 201 aa3.52□□□□□ -1.85
SCL1YGL011C YDR018CQ12185 396 aa3.52□□□□□ -1.85
SCL1YGL011C YPR1Q12458 312 aa3.52□□□□□ -1.85
SCL1YGL011C YBL111CQ3E7Y5 667 aa3.52□□□□□ -1.85
SCL1YGL011C CCH1P50077 2039 aa3.52□□□□□ -1.85
SCL1YGL011C CAR2P07991 424 aaKnown RBP3.51□□□□□ -1.85
SCL1YGL011C CYM1P32898 989 aa3.51□□□□□ -1.85
SCL1YGL011C TIP20P33891 701 aa3.51□□□□□ -1.85
SCL1YGL011C RCK1P38622 512 aa3.51□□□□□ -1.85
SCL1YGL011C YER184CP39961 794 aa3.51□□□□□ -1.85
SCL1YGL011C YFL012WP43580 148 aa3.51□□□□□ -1.85
SCL1YGL011C PMT4P46971 762 aa3.51□□□□□ -1.85
SCL1YGL011C MIM1Q08176 113 aa3.51□□□□□ -1.85
SCL1YGL011C SLF1Q12034 447 aaKnown RBP3.51□□□□□ -1.85
SCL1YGL011C FAB1P34756 2278 aa3.51□□□□□ -1.85
SCL1YGL011C FLO11P08640 1367 aa3.51□□□□□ -1.85
SCL1YGL011C STE2D6VTK4 431 aa3.5□□□□□ -1.85
SCL1YGL011C RPS19AP07280 144 aaKnown RBP3.5□□□□□ -1.85
SCL1YGL011C RPS19BP07281 144 aaPredicted RBP3.5□□□□□ -1.85
SCL1YGL011C DSE1P40077 573 aa3.5□□□□□ -1.85
SCL1YGL011C OKP1P53298 406 aa3.5□□□□□ -1.85
SCL1YGL011C IRC4Q03036 179 aa3.5□□□□□ -1.85
SCL1YGL011C VAC14Q06708 880 aa3.5□□□□□ -1.85
SCL1YGL011C MRX9Q07349 420 aaKnown RBP3.5□□□□□ -1.85
SCL1YGL011C SAM4Q08985 325 aaKnown RBP3.5□□□□□ -1.85
SCL1YGL011C ZRT1P32804 376 aa3.49□□□□□ -1.85
SCL1YGL011C DBP7P36120 742 aaKnown RBP3.49□□□□□ -1.85
SCL1YGL011C EFM1P38732 585 aa3.49□□□□□ -1.85
SCL1YGL011C PET8P38921 284 aa3.49□□□□□ -1.85
SCL1YGL011C CDC40P40968 455 aaPredicted RBP3.49□□□□□ -1.85
SCL1YGL011C HIT1P46973 164 aa3.49□□□□□ -1.85
SCL1YGL011C FLC3P53121 802 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms