RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C YBL059WP34224 193 aa1.77□□□□□ -2.13
PRE4YFR050C YCR041WP37265 110 aa1.77□□□□□ -2.13
PRE4YFR050C YBR220CP38318 560 aa1.77□□□□□ -2.13
PRE4YFR050C FAA2P39518 744 aa1.77□□□□□ -2.13
PRE4YFR050C FRT2P39734 528 aa1.77□□□□□ -2.13
PRE4YFR050C GIM4P40005 111 aaKnown RBP1.77□□□□□ -2.13
PRE4YFR050C ARF3P40994 183 aaRIP-Chip data1.77□□□□□ -2.13 RIP-Chip
PRE4YFR050C PET130P47065 347 aa1.77□□□□□ -2.13
PRE4YFR050C URB2P47108 1174 aa1.77□□□□□ -2.13
PRE4YFR050C UPF3P48412 387 aaKnown RBP1.77□□□□□ -2.13
PRE4YFR050C NBP1P52919 319 aaPredicted RBP1.77□□□□□ -2.13
PRE4YFR050C VPS75P53853 264 aa1.77□□□□□ -2.13
PRE4YFR050C EBS1Q03466 884 aaKnown RBP1.77□□□□□ -2.13
PRE4YFR050C RIM20Q12033 661 aa1.77□□□□□ -2.13
PRE4YFR050C OCA6Q12454 224 aa1.77□□□□□ -2.13
PRE4YFR050C PAR32Q12515 295 aaKnown RBP1.77□□□□□ -2.13
PRE4YFR050C MTR10Q99189 972 aa1.77□□□□□ -2.13
PRE4YFR050C HHF1P02309 103 aaKnown RBP1.76□□□□□ -2.13
PRE4YFR050C RPL31BP0C2H9 113 aaKnown RBP1.76□□□□□ -2.13
PRE4YFR050C YAR066WP0CX18 203 aa1.76□□□□□ -2.13
PRE4YFR050C YHR214WP0CX19 203 aa1.76□□□□□ -2.13
PRE4YFR050C CKA2P19454 339 aa1.76□□□□□ -2.13
PRE4YFR050C ITR1P30605 584 aa1.76□□□□□ -2.13
PRE4YFR050C PAD1P33751 242 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
PRE4YFR050C RPC37P36121 282 aa1.76□□□□□ -2.13
PRE4YFR050C PCH2P38126 564 aa1.76□□□□□ -2.13
PRE4YFR050C SMC2P38989 1170 aaKnown RBP1.76□□□□□ -2.13
PRE4YFR050C PRM9P39551 298 aa1.76□□□□□ -2.13
PRE4YFR050C RBG1P39729 369 aa1.76□□□□□ -2.13
PRE4YFR050C YEL075CP39972 122 aa1.76□□□□□ -2.13
PRE4YFR050C ISC1P40015 477 aaKnown RBP1.76□□□□□ -2.13
PRE4YFR050C SEC27P41811 889 aaKnown RBP1.76□□□□□ -2.13
PRE4YFR050C EGT2P42835 1041 aa1.76□□□□□ -2.13
PRE4YFR050C TOS3P43637 560 aa1.76□□□□□ -2.13
PRE4YFR050C TIM8P57744 87 aa1.76□□□□□ -2.13
PRE4YFR050C PBA1Q05778 276 aa1.76□□□□□ -2.13
PRE4YFR050C SWC7Q06707 132 aa1.76□□□□□ -2.13
PRE4YFR050C MMT2Q08970 484 aa1.76□□□□□ -2.13
PRE4YFR050C YOR114WQ12219 294 aa1.76□□□□□ -2.13
PRE4YFR050C EMP46Q12396 444 aa1.76□□□□□ -2.13
PRE4YFR050C PRP46Q12417 451 aaPredicted RBP1.76□□□□□ -2.13
PRE4YFR050C CEX1Q12453 761 aa1.76□□□□□ -2.13
PRE4YFR050C YDL007C-AQ2V2Q0 85 aa1.76□□□□□ -2.13
PRE4YFR050C CBP6P07253 162 aaPredicted RBP1.75□□□□□ -2.13
PRE4YFR050C MSI1P13712 422 aa1.75□□□□□ -2.13
PRE4YFR050C HEM15P16622 393 aa1.75□□□□□ -2.13
PRE4YFR050C ATP11P32453 318 aa1.75□□□□□ -2.13
PRE4YFR050C MGM101P32787 269 aaKnown RBP1.75□□□□□ -2.13
PRE4YFR050C REC114P32841 428 aa1.75□□□□□ -2.13
PRE4YFR050C MRPL4P36517 319 aa1.75□□□□□ -2.13
PRE4YFR050C NAT2P37293 288 aa1.75□□□□□ -2.13
PRE4YFR050C MTC6P38849 526 aa1.75□□□□□ -2.13
PRE4YFR050C SYG1P40528 902 aa1.75□□□□□ -2.13
PRE4YFR050C WWM1P43582 211 aaKnown RBP1.75□□□□□ -2.13
PRE4YFR050C AVT4P50944 713 aa1.75□□□□□ -2.13
PRE4YFR050C POP6P53218 158 aa1.75□□□□□ -2.13
PRE4YFR050C OGG1P53397 376 aaPredicted RBP1.75□□□□□ -2.13
PRE4YFR050C SOV1Q04748 898 aa1.75□□□□□ -2.13
PRE4YFR050C PAL1Q05518 499 aaKnown RBP1.75□□□□□ -2.13
PRE4YFR050C ESA1Q08649 445 aa1.75□□□□□ -2.13
PRE4YFR050C YPL199CQ08954 240 aa1.75□□□□□ -2.13
PRE4YFR050C YER078W-AQ3E7A2 54 aa1.75□□□□□ -2.13
PRE4YFR050C CDC21P06785 304 aa1.74□□□□□ -2.13
PRE4YFR050C CAR2P07991 424 aaKnown RBP1.74□□□□□ -2.13
PRE4YFR050C DAP2P18962 818 aa1.74□□□□□ -2.13
PRE4YFR050C RNA14P25298 677 aaKnown RBP1.74□□□□□ -2.13
PRE4YFR050C YCR100CP25606 316 aa1.74□□□□□ -2.13
PRE4YFR050C AFG1P32317 509 aa1.74□□□□□ -2.13
PRE4YFR050C GLC7P32598 312 aaKnown RBP1.74□□□□□ -2.13
PRE4YFR050C MRE11P32829 692 aa1.74□□□□□ -2.13
PRE4YFR050C HOC1P47124 396 aa1.74□□□□□ -2.13
PRE4YFR050C TWF1P53250 332 aa1.74□□□□□ -2.13
PRE4YFR050C TIM13P53299 105 aa1.74□□□□□ -2.13
PRE4YFR050C GOR1P53839 350 aa1.74□□□□□ -2.13
PRE4YFR050C PRP38Q00723 242 aaPredicted RBP1.74□□□□□ -2.13
PRE4YFR050C SKO1Q02100 647 aa1.74□□□□□ -2.13
PRE4YFR050C ADD37Q03233 198 aa1.74□□□□□ -2.13
PRE4YFR050C RAF1Q06891 181 aa1.74□□□□□ -2.13
PRE4YFR050C MUM3Q08750 479 aa1.74□□□□□ -2.13
PRE4YFR050C THP3Q12049 470 aaKnown RBP1.74□□□□□ -2.13
PRE4YFR050C ATG29Q12092 213 aa1.74□□□□□ -2.13
PRE4YFR050C YLR108CQ12259 485 aa1.74□□□□□ -2.13
PRE4YFR050C SFG1Q12507 346 aa1.74□□□□□ -2.13
PRE4YFR050C RHO2P06781 192 aa1.73□□□□□ -2.13
PRE4YFR050C MET8P15807 274 aa1.73□□□□□ -2.13
PRE4YFR050C CPR4P25334 318 aa1.73□□□□□ -2.13
PRE4YFR050C RAD14P28519 371 aa1.73□□□□□ -2.13
PRE4YFR050C AEP1P32493 518 aa1.73□□□□□ -2.13
PRE4YFR050C YEL045CP32616 141 aa1.73□□□□□ -2.13
PRE4YFR050C CMC1P36064 111 aa1.73□□□□□ -2.13
PRE4YFR050C RRT2P38332 387 aa1.73□□□□□ -2.13
PRE4YFR050C YER189WP40104 122 aa1.73□□□□□ -2.13
PRE4YFR050C SPO22P40511 975 aa1.73□□□□□ -2.13
PRE4YFR050C MET28P40573 187 aa1.73□□□□□ -2.13
PRE4YFR050C GCD10P41814 478 aa1.73□□□□□ -2.13
PRE4YFR050C PGU1P47180 361 aa1.73□□□□□ -2.13
PRE4YFR050C RMD9P53140 646 aaKnown RBP1.73□□□□□ -2.13
PRE4YFR050C YGR067CP53243 804 aa1.73□□□□□ -2.13
PRE4YFR050C BTN2P53286 410 aa1.73□□□□□ -2.13
PRE4YFR050C DSL1P53847 754 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 37 ms