RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W RPS14BP39516 138 aaKnown RBP2.66□□□□□ -1.98
SEC4YFL005W LOC1P43586 204 aaPredicted RBP2.66□□□□□ -1.98
SEC4YFL005W BIO3P50277 480 aa2.66□□□□□ -1.98
SEC4YFL005W YGL262WP53054 175 aa2.66□□□□□ -1.98
SEC4YFL005W ARP5P53946 755 aa2.66□□□□□ -1.98
SEC4YFL005W PAA1Q12447 191 aaKnown RBP2.66□□□□□ -1.98
SEC4YFL005W CTA1P15202 515 aa2.65□□□□□ -1.99
SEC4YFL005W SAR1P20606 190 aaKnown RBP2.65□□□□□ -1.99
SEC4YFL005W MEI5P32489 222 aa2.65□□□□□ -1.99
SEC4YFL005W BUD2P33314 1104 aa2.65□□□□□ -1.99
SEC4YFL005W YKL071WP36086 256 aa2.65□□□□□ -1.99
SEC4YFL005W SMF2P38778 549 aa2.65□□□□□ -1.99
SEC4YFL005W INA22P40576 216 aa2.65□□□□□ -1.99
SEC4YFL005W STB1P42845 420 aa2.65□□□□□ -1.99
SEC4YFL005W LOH1P47055 219 aa2.65□□□□□ -1.99
SEC4YFL005W RIB4P50861 169 aaPredicted RBP2.65□□□□□ -1.99
SEC4YFL005W RMI1Q02685 241 aa2.65□□□□□ -1.99
SEC4YFL005W RPL21AQ02753 160 aaKnown RBP2.65□□□□□ -1.99
SEC4YFL005W SCS7Q03529 384 aa2.65□□□□□ -1.99
SEC4YFL005W FAR10Q06001 478 aa2.65□□□□□ -1.99
SEC4YFL005W RPN8Q08723 338 aaKnown RBP2.65□□□□□ -1.99
SEC4YFL005W YOR376WQ08900 122 aa2.65□□□□□ -1.99
SEC4YFL005W SLF1Q12034 447 aaKnown RBP2.65□□□□□ -1.99
SEC4YFL005W SRO7Q12038 1033 aa2.65□□□□□ -1.99
SEC4YFL005W SAL1D6W196 494 aa2.64□□□□□ -1.99
SEC4YFL005W REP1P03871 373 aa2.64□□□□□ -1.99
SEC4YFL005W PDC2P32896 925 aa2.64□□□□□ -1.99
SEC4YFL005W CHL4P38907 458 aa2.64□□□□□ -1.99
SEC4YFL005W FET3P38993 636 aa2.64□□□□□ -1.99
SEC4YFL005W PCL7P40186 285 aa2.64□□□□□ -1.99
SEC4YFL005W CDC40P40968 455 aaPredicted RBP2.64□□□□□ -1.99
SEC4YFL005W VOA1P53262 265 aa2.64□□□□□ -1.99
SEC4YFL005W DBP6P53734 629 aaKnown RBP2.64□□□□□ -1.99
SEC4YFL005W MRX11Q03079 207 aa2.64□□□□□ -1.99
SEC4YFL005W MCH1Q07376 486 aa2.64□□□□□ -1.99
SEC4YFL005W RDL2Q08742 149 aaKnown RBP2.64□□□□□ -1.99
SEC4YFL005W YPR1Q12458 312 aa2.64□□□□□ -1.99
SEC4YFL005W DCP1Q12517 231 aaPredicted RBP2.64□□□□□ -1.99
SEC4YFL005W ADH1P00330 348 aaKnown RBP2.63□□□□□ -1.99
SEC4YFL005W DAL80P26343 269 aa2.63□□□□□ -1.99
SEC4YFL005W RPS0AP32905 252 aaKnown RBP2.63□□□□□ -1.99
SEC4YFL005W KTI12P34253 313 aaKnown RBP2.63□□□□□ -1.99
SEC4YFL005W MID2P36027 376 aa2.63□□□□□ -1.99
SEC4YFL005W YKL162CP36052 402 aa2.63□□□□□ -1.99
SEC4YFL005W MRPL40P36534 297 aa2.63□□□□□ -1.99
SEC4YFL005W EFM1P38732 585 aa2.63□□□□□ -1.99
SEC4YFL005W FHL1P39521 936 aa2.63□□□□□ -1.99
SEC4YFL005W YGR018CP53211 109 aa2.63□□□□□ -1.99
SEC4YFL005W VHS1Q03785 461 aa2.63□□□□□ -1.99
SEC4YFL005W UBX2Q04228 584 aa2.63□□□□□ -1.99
SEC4YFL005W RRG8Q06109 277 aa2.63□□□□□ -1.99
SEC4YFL005W VAC14Q06708 880 aa2.63□□□□□ -1.99
SEC4YFL005W MRX9Q07349 420 aaKnown RBP2.63□□□□□ -1.99
SEC4YFL005W DTD1Q07648 150 aaKnown RBP2.63□□□□□ -1.99
SEC4YFL005W YLR012CQ07927 99 aa2.63□□□□□ -1.99
SEC4YFL005W SAM4Q08985 325 aaKnown RBP2.63□□□□□ -1.99
SEC4YFL005W PRM4Q12498 284 aa2.63□□□□□ -1.99
SEC4YFL005W TPI1P00942 248 aaKnown RBP2.62□□□□□ -1.99
SEC4YFL005W CAR2P07991 424 aaKnown RBP2.62□□□□□ -1.99
SEC4YFL005W BGL2P15703 313 aaKnown RBP2.62□□□□□ -1.99
SEC4YFL005W DBP3P20447 523 aaKnown RBP2.62□□□□□ -1.99
SEC4YFL005W EPT1P22140 391 aa2.62□□□□□ -1.99
SEC4YFL005W SMP1P38128 452 aa2.62□□□□□ -1.99
SEC4YFL005W YHR035WP38769 630 aa2.62□□□□□ -1.99
SEC4YFL005W SEO1P39709 593 aa2.62□□□□□ -1.99
SEC4YFL005W PMT4P46971 762 aa2.62□□□□□ -1.99
SEC4YFL005W VEL1P53058 206 aa2.62□□□□□ -1.99
SEC4YFL005W OKP1P53298 406 aa2.62□□□□□ -1.99
SEC4YFL005W IRC4Q03036 179 aa2.62□□□□□ -1.99
SEC4YFL005W PFK27Q12471 397 aaPredicted RBP2.62□□□□□ -1.99
SEC4YFL005W YIL002W-AQ3E7Z5 69 aa2.62□□□□□ -1.99
SEC4YFL005W MHP1P43638 1398 aa2.61□□□□□ -1.99
SEC4YFL005W STE2D6VTK4 431 aa2.61□□□□□ -1.99
SEC4YFL005W SPS19P32573 292 aaKnown RBP2.61□□□□□ -1.99
SEC4YFL005W MRPS9P38120 278 aa2.61□□□□□ -1.99
SEC4YFL005W GGC1P38988 300 aa2.61□□□□□ -1.99
SEC4YFL005W YFL040WP43562 540 aa2.61□□□□□ -1.99
SEC4YFL005W TPC1P53257 314 aa2.61□□□□□ -1.99
SEC4YFL005W NRM1P53718 249 aa2.61□□□□□ -1.99
SEC4YFL005W ERV25P54837 211 aaKnown RBP2.61□□□□□ -1.99
SEC4YFL005W SED5Q01590 340 aa2.61□□□□□ -1.99
SEC4YFL005W APC4Q04601 652 aa2.61□□□□□ -1.99
SEC4YFL005W MMT2Q08970 484 aa2.61□□□□□ -1.99
SEC4YFL005W UGA1P17649 471 aa2.6□□□□□ -1.99
SEC4YFL005W RPL5P26321 297 aaKnown RBP2.6□□□□□ -1.99
SEC4YFL005W RAD23P32628 398 aaKnown RBP2.6□□□□□ -1.99
SEC4YFL005W ZRT1P32804 376 aa2.6□□□□□ -1.99
SEC4YFL005W CBF5P33322 483 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
SEC4YFL005W TIP20P33891 701 aa2.6□□□□□ -1.99
SEC4YFL005W RPC25P35718 212 aa2.6□□□□□ -1.99
SEC4YFL005W EBP2P36049 427 aaKnown RBP2.6□□□□□ -1.99
SEC4YFL005W DTR1P38125 572 aa2.6□□□□□ -1.99
SEC4YFL005W RCK1P38622 512 aa2.6□□□□□ -1.99
SEC4YFL005W ECM34P38728 170 aa2.6□□□□□ -1.99
SEC4YFL005W COX16P47081 118 aa2.6□□□□□ -1.99
SEC4YFL005W EGD1Q02642 157 aaKnown RBP2.6□□□□□ -1.99
SEC4YFL005W YPL080CQ02826 108 aa2.6□□□□□ -1.99
SEC4YFL005W SPO19Q03029 223 aa2.6□□□□□ -1.99
SEC4YFL005W BSC6Q08280 497 aa2.6□□□□□ -1.99
SEC4YFL005W SIA1Q12212 622 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms