RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C ARF2P19146 181 aaKnown RBP1.73□□□□□ -2.13
SMB1YER029C URA10P30402 227 aa1.73□□□□□ -2.13
SMB1YER029C DAD2P36162 133 aa1.73□□□□□ -2.13
SMB1YER029C YMR262WP38430 313 aa1.73□□□□□ -2.13
SMB1YER029C YIL089WP40500 205 aa1.73□□□□□ -2.13
SMB1YER029C YNL320WP42840 284 aa1.73□□□□□ -2.13
SMB1YER029C YNL143CP53908 130 aa1.73□□□□□ -2.13
SMB1YER029C RCF1Q03713 159 aa1.73□□□□□ -2.13
SMB1YER029C VTI1Q04338 217 aa1.73□□□□□ -2.13
SMB1YER029C GMC1Q04399 608 aa1.73□□□□□ -2.13
SMB1YER029C SPH1Q06160 661 aa1.73□□□□□ -2.13
SMB1YER029C VPS63O13549 108 aa1.72□□□□□ -2.13
SMB1YER029C HSP82P02829 709 aaKnown RBP1.72□□□□□ -2.13
SMB1YER029C CUP2P15315 225 aa1.72□□□□□ -2.13
SMB1YER029C SAG1P20840 650 aa1.72□□□□□ -2.13
SMB1YER029C HMX1P32339 317 aa1.72□□□□□ -2.13
SMB1YER029C RCK1P38622 512 aa1.72□□□□□ -2.13
SMB1YER029C YMR134WP40207 237 aa1.72□□□□□ -2.13
SMB1YER029C RPA34P47006 233 aaPredicted RBP1.72□□□□□ -2.13
SMB1YER029C YJL144WP47009 104 aa1.72□□□□□ -2.13
SMB1YER029C YMR244WQ04018 355 aa1.72□□□□□ -2.13
SMB1YER029C APC5Q08683 685 aa1.72□□□□□ -2.13
SMB1YER029C RPS23AP0CX29 145 aaKnown RBP1.71□□□□□ -2.14
SMB1YER029C RPS23BP0CX30 145 aa1.71□□□□□ -2.14
SMB1YER029C ZRT3P34240 503 aa1.71□□□□□ -2.14
SMB1YER029C YKL071WP36086 256 aa1.71□□□□□ -2.14
SMB1YER029C SDH4P37298 181 aa1.71□□□□□ -2.14
SMB1YER029C YIL059CP40520 121 aa1.71□□□□□ -2.14
SMB1YER029C NRM1P53718 249 aa1.71□□□□□ -2.14
SMB1YER029C EOS1P53938 366 aa1.71□□□□□ -2.14
SMB1YER029C INP1Q03694 420 aa1.71□□□□□ -2.14
SMB1YER029C UTP15Q04305 513 aaKnown RBP1.71□□□□□ -2.14
SMB1YER029C YMR310CQ04867 317 aaPredicted RBP1.71□□□□□ -2.14
SMB1YER029C YDR222WQ04925 415 aa1.71□□□□□ -2.14
SMB1YER029C DBP9Q06218 594 aaKnown RBP1.71□□□□□ -2.14
SMB1YER029C MIM1Q08176 113 aa1.71□□□□□ -2.14
SMB1YER029C NFI1Q12216 726 aa1.71□□□□□ -2.14
SMB1YER029C PRP46Q12417 451 aaPredicted RBP1.71□□□□□ -2.14
SMB1YER029C STE3P06783 470 aa1.7□□□□□ -2.14
SMB1YER029C CPT1P17898 393 aa1.7□□□□□ -2.14
SMB1YER029C POT1P27796 417 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
SMB1YER029C SWI3P32591 825 aa1.7□□□□□ -2.14
SMB1YER029C YKL187CP34231 750 aa1.7□□□□□ -2.14
SMB1YER029C PCH2P38126 564 aa1.7□□□□□ -2.14
SMB1YER029C MMS21P38632 267 aa1.7□□□□□ -2.14
SMB1YER029C APE4P38821 490 aa1.7□□□□□ -2.14
SMB1YER029C SDS23P53172 527 aa1.7□□□□□ -2.14
SMB1YER029C GTO3Q04806 366 aa1.7□□□□□ -2.14
SMB1YER029C REP1P03871 373 aa1.69□□□□□ -2.14
SMB1YER029C HXT2P23585 541 aa1.69□□□□□ -2.14
SMB1YER029C PHO84P25297 587 aaKnown RBP1.69□□□□□ -2.14
SMB1YER029C DCC1P25559 380 aa1.69□□□□□ -2.14
SMB1YER029C BLI1P35727 113 aa1.69□□□□□ -2.14
SMB1YER029C LAS1P36146 502 aaPredicted RBP1.69□□□□□ -2.14
SMB1YER029C SIF2P38262 535 aa1.69□□□□□ -2.14
SMB1YER029C IML3P38265 245 aa1.69□□□□□ -2.14
SMB1YER029C SMF2P38778 549 aa1.69□□□□□ -2.14
SMB1YER029C RRB1Q04225 511 aaKnown RBP1.69□□□□□ -2.14
SMB1YER029C NBL1Q3E7Y6 73 aa1.69□□□□□ -2.14
SMB1YER029C DAL5P15365 543 aa1.68□□□□□ -2.14
SMB1YER029C CIN8P27895 1000 aa1.68□□□□□ -2.14
SMB1YER029C VPH1P32563 840 aaKnown RBP1.68□□□□□ -2.14
SMB1YER029C BUD2P33314 1104 aa1.68□□□□□ -2.14
SMB1YER029C RFT1P38206 574 aaPredicted RBP1.68□□□□□ -2.14
SMB1YER029C DSE1P40077 573 aa1.68□□□□□ -2.14
SMB1YER029C PMT4P46971 762 aa1.68□□□□□ -2.14
SMB1YER029C ACT1P60010 375 aaKnown RBP1.68□□□□□ -2.14
SMB1YER029C PML1Q07930 204 aaPredicted RBP1.68□□□□□ -2.14
SMB1YER029C SGT2Q12118 346 aaKnown RBP1.68□□□□□ -2.14
SMB1YER029C SPO24Q3E752 67 aa1.68□□□□□ -2.14
SMB1YER029C MHP1P43638 1398 aa1.68□□□□□ -2.14
SMB1YER029C SPT7P35177 1332 aa1.67□□□□□ -2.14
SMB1YER029C SPS100P13130 326 aa1.67□□□□□ -2.14
SMB1YER029C CTA1P15202 515 aa1.67□□□□□ -2.14
SMB1YER029C DAL81P21657 970 aa1.67□□□□□ -2.14
SMB1YER029C ECM14P38836 430 aa1.67□□□□□ -2.14
SMB1YER029C ALP1P38971 573 aa1.67□□□□□ -2.14
SMB1YER029C SMC2P38989 1170 aaKnown RBP1.67□□□□□ -2.14
SMB1YER029C BTT1P40314 149 aaPredicted RBP1.67□□□□□ -2.14
SMB1YER029C SLM1P40485 686 aa1.67□□□□□ -2.14
SMB1YER029C YFL040WP43562 540 aa1.67□□□□□ -2.14
SMB1YER029C MIC19P43594 170 aa1.67□□□□□ -2.14
SMB1YER029C FMP48P53233 369 aa1.67□□□□□ -2.14
SMB1YER029C RDL2Q08742 149 aaKnown RBP1.67□□□□□ -2.14
SMB1YER029C YPL264CQ08980 353 aa1.67□□□□□ -2.14
SMB1YER029C GLE1Q12315 538 aa1.67□□□□□ -2.14
SMB1YER029C TRM10Q12400 293 aa1.67□□□□□ -2.14
SMB1YER029C INO2P26798 304 aa1.66□□□□□ -2.14
SMB1YER029C ALK2P32789 676 aaPredicted RBP1.66□□□□□ -2.14
SMB1YER029C MYO3P36006 1272 aa1.66□□□□□ -2.14
SMB1YER029C PRP39P39682 629 aaKnown RBP1.66□□□□□ -2.14
SMB1YER029C CUE3P53137 624 aaKnown RBP1.66□□□□□ -2.14
SMB1YER029C PXR1P53335 271 aaPredicted RBP1.66□□□□□ -2.14
SMB1YER029C PDR16P53860 351 aaKnown RBP1.66□□□□□ -2.14
SMB1YER029C AQR1P53943 586 aa1.66□□□□□ -2.14
SMB1YER029C ARR1Q06596 294 aa1.66□□□□□ -2.14
SMB1YER029C PRM4Q12498 284 aa1.66□□□□□ -2.14
SMB1YER029C TDH2P00358 332 aaKnown RBP1.65□□□□□ -2.15
SMB1YER029C TDH3P00359 332 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
SMB1YER029C TKL2P33315 681 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms