RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C GAT3Q07928 141 aa3.93□□□□□ -1.78
RPB7YDR404C SMC5Q08204 1093 aa3.93□□□□□ -1.78
RPB7YDR404C PPT2Q12036 173 aa3.93□□□□□ -1.78
RPB7YDR404C YDR262WQ12331 272 aa3.93□□□□□ -1.78
RPB7YDR404C YRM1Q12340 786 aa3.93□□□□□ -1.78
RPB7YDR404C TRP1P00912 224 aa3.92□□□□□ -1.78
RPB7YDR404C CPR4P25334 318 aa3.92□□□□□ -1.78
RPB7YDR404C SSE1P32589 693 aaKnown RBP3.92□□□□□ -1.78
RPB7YDR404C MRPS5P33759 307 aa3.92□□□□□ -1.78
RPB7YDR404C RTC2P38279 296 aa3.92□□□□□ -1.78
RPB7YDR404C SWC5P38326 303 aa3.92□□□□□ -1.78
RPB7YDR404C YHK8P38776 514 aa3.92□□□□□ -1.78
RPB7YDR404C GAA1P39012 614 aa3.92□□□□□ -1.78
RPB7YDR404C CCT4P39078 528 aaKnown RBP3.92□□□□□ -1.78
RPB7YDR404C SEC9P40357 651 aa3.92□□□□□ -1.78
RPB7YDR404C PRM5P40476 318 aa3.92□□□□□ -1.78
RPB7YDR404C MRM2P53123 320 aa3.92□□□□□ -1.78
RPB7YDR404C MTM1P53320 366 aa3.92□□□□□ -1.78
RPB7YDR404C TRM112P53738 135 aaPredicted RBP3.92□□□□□ -1.78
RPB7YDR404C ALG11P53954 548 aaKnown RBP3.92□□□□□ -1.78
RPB7YDR404C CAB5Q03941 241 aa3.92□□□□□ -1.78
RPB7YDR404C RTT103Q05543 409 aa3.92□□□□□ -1.78
RPB7YDR404C NDE2Q07500 545 aa3.92□□□□□ -1.78
RPB7YDR404C SHS1Q07657 551 aa3.92□□□□□ -1.78
RPB7YDR404C ESA1Q08649 445 aa3.92□□□□□ -1.78
RPB7YDR404C YBR298C-AQ8TGK4 73 aa3.92□□□□□ -1.78
RPB7YDR404C OM45P16547 393 aa3.91□□□□□ -1.78
RPB7YDR404C PRR1P28708 518 aa3.91□□□□□ -1.78
RPB7YDR404C DPH5P32469 300 aaPredicted RBP3.91□□□□□ -1.78
RPB7YDR404C MNS1P32906 549 aa3.91□□□□□ -1.78
RPB7YDR404C RIB7P33312 244 aa3.91□□□□□ -1.78
RPB7YDR404C MRX3P38172 270 aa3.91□□□□□ -1.78
RPB7YDR404C SEC27P41811 889 aaKnown RBP3.91□□□□□ -1.78
RPB7YDR404C NUP116Q02630 1113 aa3.91□□□□□ -1.78
RPB7YDR404C NAT4Q04751 285 aa3.91□□□□□ -1.78
RPB7YDR404C IES4Q08561 116 aa3.91□□□□□ -1.78
RPB7YDR404C HRT3Q12347 344 aa3.91□□□□□ -1.78
RPB7YDR404C RRP36Q12481 300 aaPredicted RBP3.91□□□□□ -1.78
RPB7YDR404C YER078W-AQ3E7A2 54 aa3.91□□□□□ -1.78
RPB7YDR404C RAD50P12753 1312 aa3.91□□□□□ -1.78
RPB7YDR404C GAL7P08431 366 aa3.9□□□□□ -1.79
RPB7YDR404C RPL18AP0CX49 186 aaKnown RBP3.9□□□□□ -1.79
RPB7YDR404C RPL18BP0CX50 186 aaKnown RBP3.9□□□□□ -1.79
RPB7YDR404C FAR1P21268 830 aa3.9□□□□□ -1.79
RPB7YDR404C CIN8P27895 1000 aa3.9□□□□□ -1.79
RPB7YDR404C YPS1P32329 569 aa3.9□□□□□ -1.79
RPB7YDR404C KAR9P32526 644 aa3.9□□□□□ -1.79
RPB7YDR404C SRX1P36077 127 aa3.9□□□□□ -1.79
RPB7YDR404C ATG7P38862 630 aa3.9□□□□□ -1.79
RPB7YDR404C YMR134WP40207 237 aa3.9□□□□□ -1.79
RPB7YDR404C YIL029CP40538 142 aa3.9□□□□□ -1.79
RPB7YDR404C MRPL35Q06678 367 aa3.9□□□□□ -1.79
RPB7YDR404C TSR1Q07381 788 aaKnown RBP3.9□□□□□ -1.79
RPB7YDR404C YOL075CQ08234 1294 aa3.9□□□□□ -1.79
RPB7YDR404C APC5Q08683 685 aa3.9□□□□□ -1.79
RPB7YDR404C YCR024C-BQ3E7Z8 88 aa3.9□□□□□ -1.79
RPB7YDR404C RGS2Q99188 309 aa3.9□□□□□ -1.79
RPB7YDR404C PUT4P15380 627 aa3.89□□□□□ -1.79
RPB7YDR404C LOC1P43586 204 aaPredicted RBP3.89□□□□□ -1.79
RPB7YDR404C LCB3P47013 409 aa3.89□□□□□ -1.79
RPB7YDR404C RIB4P50861 169 aaPredicted RBP3.89□□□□□ -1.79
RPB7YDR404C DBP6P53734 629 aaKnown RBP3.89□□□□□ -1.79
RPB7YDR404C EGD1Q02642 157 aaKnown RBP3.89□□□□□ -1.79
RPB7YDR404C CWC21Q03375 135 aaKnown RBP3.89□□□□□ -1.79
RPB7YDR404C TDA1Q03533 586 aa3.89□□□□□ -1.79
RPB7YDR404C ECM18Q04623 453 aa3.89□□□□□ -1.79
RPB7YDR404C YLH47Q06493 454 aa3.89□□□□□ -1.79
RPB7YDR404C EAF3Q12432 401 aa3.89□□□□□ -1.79
RPB7YDR404C YMR230W-AQ3E7B5 62 aa3.89□□□□□ -1.79
RPB7YDR404C YIL046W-AQ3E7Z4 54 aa3.89□□□□□ -1.79
RPB7YDR404C YIL002W-AQ3E7Z5 69 aa3.89□□□□□ -1.79
RPB7YDR404C DET1Q99288 334 aaKnown RBP3.89□□□□□ -1.79
RPB7YDR404C PIS1P06197 220 aaKnown RBP3.88□□□□□ -1.79
RPB7YDR404C UTR1P21373 530 aa3.88□□□□□ -1.79
RPB7YDR404C SDH3P33421 198 aa3.88□□□□□ -1.79
RPB7YDR404C EBP2P36049 427 aaKnown RBP3.88□□□□□ -1.79
RPB7YDR404C FMP46P36141 133 aaKnown RBP3.88□□□□□ -1.79
RPB7YDR404C PEX32P38292 413 aa3.88□□□□□ -1.79
RPB7YDR404C KRE9P39005 276 aa3.88□□□□□ -1.79
RPB7YDR404C BTT1P40314 149 aaPredicted RBP3.88□□□□□ -1.79
RPB7YDR404C ERG10P41338 398 aaKnown RBP3.88□□□□□ -1.79
RPB7YDR404C PNC1P53184 216 aaKnown RBP3.88□□□□□ -1.79
RPB7YDR404C LST7P53237 242 aa3.88□□□□□ -1.79
RPB7YDR404C YMR102CQ03177 834 aa3.88□□□□□ -1.79
RPB7YDR404C RRN11Q04712 507 aa3.88□□□□□ -1.79
RPB7YDR404C CDD1Q06549 142 aa3.88□□□□□ -1.79
RPB7YDR404C YLR413WQ06689 675 aa3.88□□□□□ -1.79
RPB7YDR404C LOT6Q07923 191 aa3.88□□□□□ -1.79
RPB7YDR404C RAD1P06777 1100 aa3.87□□□□□ -1.79
RPB7YDR404C RPS8AP0CX39 200 aaKnown RBP3.87□□□□□ -1.79
RPB7YDR404C RPS8BP0CX40 200 aaKnown RBP3.87□□□□□ -1.79
RPB7YDR404C ARF2P19146 181 aaKnown RBP3.87□□□□□ -1.79
RPB7YDR404C FPR1P20081 114 aaKnown RBP3.87□□□□□ -1.79
RPB7YDR404C RAD5P32849 1169 aaPredicted RBP3.87□□□□□ -1.79
RPB7YDR404C SKG6P32900 734 aaPredicted RBP3.87□□□□□ -1.79
RPB7YDR404C IST2P38250 946 aa3.87□□□□□ -1.79
RPB7YDR404C YHR182WP38870 785 aa3.87□□□□□ -1.79
RPB7YDR404C BAT1P38891 393 aaKnown RBP3.87□□□□□ -1.79
RPB7YDR404C KEG1P43614 200 aa3.87□□□□□ -1.79
RPB7YDR404C AIP1P46680 615 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms