RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W OAC1P32332 324 aa1.55□□□□□ -2.16
CFT1YDR301W GPX1P36014 167 aa1.55□□□□□ -2.16
CFT1YDR301W VPS51P36116 164 aa1.55□□□□□ -2.16
CFT1YDR301W SPC34P36131 295 aa1.55□□□□□ -2.16
CFT1YDR301W MRPL16P38064 232 aa1.55□□□□□ -2.16
CFT1YDR301W KRE29P40026 464 aa1.55□□□□□ -2.16
CFT1YDR301W YIL166CP40445 542 aa1.55□□□□□ -2.16
CFT1YDR301W SEC24P40482 926 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W UTP25P40498 721 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W YRB2P40517 327 aa1.55□□□□□ -2.16
CFT1YDR301W ARF3P40994 183 aaRIP-Chip data1.55□□□□□ -2.16not detected
CFT1YDR301W CAK1P43568 368 aaPredicted RBP1.55□□□□□ -2.16
CFT1YDR301W YJR096WP47137 282 aa1.55□□□□□ -2.16
CFT1YDR301W PGU1P47180 361 aa1.55□□□□□ -2.16
CFT1YDR301W COS10P52924 374 aa1.55□□□□□ -2.16
CFT1YDR301W CDH1P53197 566 aa1.55□□□□□ -2.16
CFT1YDR301W PFA5Q03289 374 aa1.55□□□□□ -2.16
CFT1YDR301W YMR010WQ03687 405 aa1.55□□□□□ -2.16
CFT1YDR301W YDR444WQ04093 687 aa1.55□□□□□ -2.16
CFT1YDR301W ELP6Q04868 273 aa1.55□□□□□ -2.16
CFT1YDR301W PAL1Q05518 499 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W YLR345WQ06137 509 aa1.55□□□□□ -2.16
CFT1YDR301W NIP7Q08962 181 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W ENV7Q12003 364 aa1.55□□□□□ -2.16
CFT1YDR301W YDL109CQ12103 647 aa1.55□□□□□ -2.16
CFT1YDR301W RLM1Q12224 676 aa1.55□□□□□ -2.16
CFT1YDR301W AIR2Q12476 344 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W RPL11BQ3E757 174 aaPredicted RBP1.55□□□□□ -2.16
CFT1YDR301W DFG16Q99234 619 aa1.55□□□□□ -2.16
CFT1YDR301W BRR2P32639 2163 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W CDC36P06100 191 aaPredicted RBP1.55□□□□□ -2.16
CFT1YDR301W YOL162WP0CF19 215 aa1.55□□□□□ -2.16
CFT1YDR301W MXR2P25566 168 aa1.55□□□□□ -2.16
CFT1YDR301W YCR102CP25608 368 aa1.55□□□□□ -2.16
CFT1YDR301W SSE2P32590 693 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W NSG1P38837 291 aa1.55□□□□□ -2.16
CFT1YDR301W RRG9P40156 214 aa1.55□□□□□ -2.16
CFT1YDR301W HXT9P40885 567 aa1.55□□□□□ -2.16
CFT1YDR301W STB1P42845 420 aa1.55□□□□□ -2.16
CFT1YDR301W BNA3P47039 444 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W GPG1P53130 126 aa1.55□□□□□ -2.16
CFT1YDR301W TPC1P53257 314 aa1.55□□□□□ -2.16
CFT1YDR301W MRPL19P53875 158 aa1.55□□□□□ -2.16
CFT1YDR301W MTQ1P53944 314 aa1.55□□□□□ -2.16
CFT1YDR301W ASI1P54074 624 aa1.55□□□□□ -2.16
CFT1YDR301W HXT11P54862 567 aa1.55□□□□□ -2.16
CFT1YDR301W SIZ1Q04195 904 aa1.55□□□□□ -2.16
CFT1YDR301W HLR1Q04429 423 aa1.55□□□□□ -2.16
CFT1YDR301W MDM30Q05930 598 aa1.55□□□□□ -2.16
CFT1YDR301W ATG33Q06485 197 aa1.55□□□□□ -2.16
CFT1YDR301W YDL114WQ07530 308 aa1.55□□□□□ -2.16
CFT1YDR301W HER1Q12276 1246 aa1.55□□□□□ -2.16
CFT1YDR301W DBP10Q12389 995 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W FRE6Q12473 712 aa1.55□□□□□ -2.16
CFT1YDR301W SKS1Q12505 502 aa1.55□□□□□ -2.16
CFT1YDR301W YLR358CO13565 187 aa1.55□□□□□ -2.16
CFT1YDR301W CDC9P04819 755 aa1.55□□□□□ -2.16
CFT1YDR301W RPL20AP0CX23 172 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W RPL20BP0CX24 172 aaPredicted RBP1.55□□□□□ -2.16
CFT1YDR301W UTR1P21373 530 aa1.55□□□□□ -2.16
CFT1YDR301W PRE7P23724 241 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W SNC1P31109 117 aa1.55□□□□□ -2.16
CFT1YDR301W SLC1P33333 303 aa1.55□□□□□ -2.16
CFT1YDR301W TIF3P34167 436 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W SLM4P38247 162 aa1.55□□□□□ -2.16
CFT1YDR301W YMR262WP38430 313 aa1.55□□□□□ -2.16
CFT1YDR301W OSH7P38755 437 aa1.55□□□□□ -2.16
CFT1YDR301W MBP1P39678 833 aa1.55□□□□□ -2.16
CFT1YDR301W GDI1P39958 451 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W COG3P40094 801 aa1.55□□□□□ -2.16
CFT1YDR301W MSS2P40990 351 aa1.55□□□□□ -2.16
CFT1YDR301W SLS1P42900 643 aa1.55□□□□□ -2.16
CFT1YDR301W RBL2P48606 106 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W SCW11P53189 542 aa1.55□□□□□ -2.16
CFT1YDR301W NQM1P53228 333 aaPredicted RBP1.55□□□□□ -2.16
CFT1YDR301W YGR054WP53235 642 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W MKC7P53379 596 aa1.55□□□□□ -2.16
CFT1YDR301W DCP2P53550 970 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W MRPL13Q02204 264 aa1.55□□□□□ -2.16
CFT1YDR301W MSC1Q03104 513 aa1.55□□□□□ -2.16
CFT1YDR301W YMR099CQ03161 297 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W YDR249CQ03787 373 aa1.55□□□□□ -2.16
CFT1YDR301W YDR179W-AQ03983 463 aa1.55□□□□□ -2.16
CFT1YDR301W HRI1Q05905 244 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W LOT6Q07923 191 aa1.55□□□□□ -2.16
CFT1YDR301W ENB1Q08299 606 aa1.55□□□□□ -2.16
CFT1YDR301W ACF2Q12168 779 aa1.55□□□□□ -2.16
CFT1YDR301W FLO9P39712 1322 aa1.54□□□□□ -2.16
CFT1YDR301W CSF1Q12150 2958 aa1.54□□□□□ -2.16
CFT1YDR301W PEP4P07267 405 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W YSF3P0C074 85 aaPredicted RBP1.54□□□□□ -2.16
CFT1YDR301W SNF6P18888 332 aa1.54□□□□□ -2.16
CFT1YDR301W NUP1P20676 1076 aa1.54□□□□□ -2.16
CFT1YDR301W ERG8P24521 451 aa1.54□□□□□ -2.16
CFT1YDR301W RPN2P32565 945 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W NRP1P32770 719 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
CFT1YDR301W RPT5P33297 434 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W CTF8P38877 133 aa1.54□□□□□ -2.16
CFT1YDR301W AST2P39945 430 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W CUP9P41817 306 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms