RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	RXT2	P38255	430 aa		3.06	□□□□□ -1.92
UBS1	YBR165W	YMR134W	P40207	237 aa		3.06	□□□□□ -1.92
UBS1	YBR165W	YIL059C	P40520	121 aa		3.06	□□□□□ -1.92
UBS1	YBR165W	EOS1	P53938	366 aa		3.06	□□□□□ -1.92
UBS1	YBR165W	UTP15	Q04305	513 aa	Known RBP	3.06	□□□□□ -1.92
UBS1	YBR165W	YMR310C	Q04867	317 aa	Predicted RBP	3.06	□□□□□ -1.92
UBS1	YBR165W	DIB1	Q06819	143 aa	Predicted RBP	3.06	□□□□□ -1.92
UBS1	YBR165W	RAD1	P06777	1100 aa		3.05	□□□□□ -1.92
UBS1	YBR165W	CPT1	P17898	393 aa		3.05	□□□□□ -1.92
UBS1	YBR165W	PEX32	P38292	413 aa		3.05	□□□□□ -1.92
UBS1	YBR165W	RPA34	P47006	233 aa	Predicted RBP	3.05	□□□□□ -1.92
UBS1	YBR165W	NRM1	P53718	249 aa		3.05	□□□□□ -1.92
UBS1	YBR165W	RRB1	Q04225	511 aa	Known RBP	3.05	□□□□□ -1.92
UBS1	YBR165W	ECM19	Q06011	112 aa		3.05	□□□□□ -1.92
UBS1	YBR165W	HRT1	Q08273	121 aa		3.05	□□□□□ -1.92
UBS1	YBR165W	ADH5	P38113	351 aa	Known RBP	3.04	□□□□□ -1.92
UBS1	YBR165W	YMR262W	P38430	313 aa		3.04	□□□□□ -1.92
UBS1	YBR165W	YJL144W	P47009	104 aa		3.04	□□□□□ -1.92
UBS1	YBR165W	SPH1	Q06160	661 aa		3.04	□□□□□ -1.92
UBS1	YBR165W	GLE1	Q12315	538 aa		3.04	□□□□□ -1.92
UBS1	YBR165W	DFM1	Q12743	341 aa	Known RBP	3.04	□□□□□ -1.92
UBS1	YBR165W	HSP82	P02829	709 aa	Known RBP	3.03	□□□□□ -1.92
UBS1	YBR165W	MIC19	P43594	170 aa		3.03	□□□□□ -1.92
UBS1	YBR165W	SAL1	D6W196	494 aa		3.02	□□□□□ -1.93
UBS1	YBR165W	DCC1	P25559	380 aa		3.02	□□□□□ -1.93
UBS1	YBR165W	RPB9	P27999	122 aa		3.02	□□□□□ -1.93
UBS1	YBR165W	MMS21	P38632	267 aa		3.02	□□□□□ -1.93
UBS1	YBR165W	INP1	Q03694	420 aa		3.02	□□□□□ -1.93
UBS1	YBR165W	FRE6	Q12473	712 aa		3.02	□□□□□ -1.93
UBS1	YBR165W	SAG1	P20840	650 aa		3.01	□□□□□ -1.93
UBS1	YBR165W	TPC1	P53257	314 aa		3.01	□□□□□ -1.93
UBS1	YBR165W	YNL143C	P53908	130 aa		3.01	□□□□□ -1.93
UBS1	YBR165W	YMR244W	Q04018	355 aa		3.01	□□□□□ -1.93
UBS1	YBR165W	PRP46	Q12417	451 aa	Predicted RBP	3.01	□□□□□ -1.93
UBS1	YBR165W	NBL1	Q3E7Y6	73 aa		3.01	□□□□□ -1.93
UBS1	YBR165W	YPR096C	O13587	100 aa		3	□□□□□ -1.93
UBS1	YBR165W	RPS23A	P0CX29	145 aa	Known RBP	3	□□□□□ -1.93
UBS1	YBR165W	RPS23B	P0CX30	145 aa		3	□□□□□ -1.93
UBS1	YBR165W	CTA1	P15202	515 aa		3	□□□□□ -1.93
UBS1	YBR165W	DAL5	P15365	543 aa		3	□□□□□ -1.93
UBS1	YBR165W	PHO84	P25297	587 aa	Known RBP	3	□□□□□ -1.93
UBS1	YBR165W	YKL187C	P34231	750 aa		3	□□□□□ -1.93
UBS1	YBR165W	ZRT3	P34240	503 aa		3	□□□□□ -1.93
UBS1	YBR165W	IML3	P38265	245 aa		3	□□□□□ -1.93
UBS1	YBR165W	RFT1	P38206	574 aa	Predicted RBP	2.99	□□□□□ -1.93
UBS1	YBR165W	SDS23	P53172	527 aa		2.99	□□□□□ -1.93
UBS1	YBR165W	RCF1	Q03713	159 aa		2.99	□□□□□ -1.93
UBS1	YBR165W	HPR1	P17629	752 aa	Known RBP	2.98	□□□□□ -1.93
UBS1	YBR165W	HXT2	P23585	541 aa		2.98	□□□□□ -1.93
UBS1	YBR165W	YIL054W	P40524	105 aa		2.98	□□□□□ -1.93
UBS1	YBR165W	HIT1	P46973	164 aa		2.98	□□□□□ -1.93
UBS1	YBR165W	FMP48	P53233	369 aa		2.98	□□□□□ -1.93
UBS1	YBR165W	ARR1	Q06596	294 aa		2.98	□□□□□ -1.93
UBS1	YBR165W	MHP1	P43638	1398 aa		2.98	□□□□□ -1.93
UBS1	YBR165W	REP1	P03871	373 aa		2.97	□□□□□ -1.93
UBS1	YBR165W	STE3	P06783	470 aa		2.97	□□□□□ -1.93
UBS1	YBR165W	SDH4	P37298	181 aa		2.97	□□□□□ -1.93
UBS1	YBR165W	RCK1	P38622	512 aa		2.97	□□□□□ -1.93
UBS1	YBR165W	ECM14	P38836	430 aa		2.97	□□□□□ -1.93
UBS1	YBR165W	PMT4	P46971	762 aa		2.97	□□□□□ -1.93
UBS1	YBR165W	DBP9	Q06218	594 aa	Known RBP	2.97	□□□□□ -1.93
UBS1	YBR165W	PRM4	Q12498	284 aa		2.97	□□□□□ -1.93
UBS1	YBR165W	CIN8	P27895	1000 aa		2.96	□□□□□ -1.94
UBS1	YBR165W	BUD2	P33314	1104 aa		2.96	□□□□□ -1.94
UBS1	YBR165W	SMF2	P38778	549 aa		2.96	□□□□□ -1.94
UBS1	YBR165W	INO2	P26798	304 aa		2.95	□□□□□ -1.94
UBS1	YBR165W	KTI12	P34253	313 aa	Known RBP	2.95	□□□□□ -1.94
UBS1	YBR165W	MYO3	P36006	1272 aa		2.95	□□□□□ -1.94
UBS1	YBR165W	LAS1	P36146	502 aa	Predicted RBP	2.95	□□□□□ -1.94
UBS1	YBR165W	DSE1	P40077	573 aa		2.95	□□□□□ -1.94
UBS1	YBR165W	YIL089W	P40500	205 aa		2.95	□□□□□ -1.94
UBS1	YBR165W	ASG7	P46993	209 aa		2.95	□□□□□ -1.94
UBS1	YBR165W	HCH1	P53834	153 aa		2.95	□□□□□ -1.94
UBS1	YBR165W	GTO3	Q04806	366 aa		2.95	□□□□□ -1.94
UBS1	YBR165W	MRX9	Q07349	420 aa	Known RBP	2.95	□□□□□ -1.94
UBS1	YBR165W	YPL264C	Q08980	353 aa		2.95	□□□□□ -1.94
UBS1	YBR165W	RGS2	Q99188	309 aa		2.95	□□□□□ -1.94
UBS1	YBR165W	YLL053C	P0CD98	152 aa		2.94	□□□□□ -1.94
UBS1	YBR165W	ITR2	P30606	609 aa		2.94	□□□□□ -1.94
UBS1	YBR165W	TKL2	P33315	681 aa		2.94	□□□□□ -1.94
UBS1	YBR165W	BTT1	P40314	149 aa	Predicted RBP	2.94	□□□□□ -1.94
UBS1	YBR165W	SLM1	P40485	686 aa		2.94	□□□□□ -1.94
UBS1	YBR165W	AQR1	P53943	586 aa		2.94	□□□□□ -1.94
UBS1	YBR165W	MIM1	Q08176	113 aa		2.94	□□□□□ -1.94
UBS1	YBR165W	TRM10	Q12400	293 aa		2.94	□□□□□ -1.94
UBS1	YBR165W	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.93	□□□□□ -1.94	not detected
UBS1	YBR165W	ALK2	P32789	676 aa	Predicted RBP	2.93	□□□□□ -1.94
UBS1	YBR165W	ALP1	P38971	573 aa		2.93	□□□□□ -1.94
UBS1	YBR165W	CAX4	P53223	239 aa		2.93	□□□□□ -1.94
UBS1	YBR165W	YDR222W	Q04925	415 aa		2.93	□□□□□ -1.94
UBS1	YBR165W	DTD1	Q07648	150 aa	Known RBP	2.93	□□□□□ -1.94
UBS1	YBR165W	SGT2	Q12118	346 aa	Known RBP	2.93	□□□□□ -1.94
UBS1	YBR165W	YPR063C	Q12160	140 aa		2.93	□□□□□ -1.94
UBS1	YBR165W	SMC2	P38989	1170 aa	Known RBP	2.92	□□□□□ -1.94
UBS1	YBR165W	PRP39	P39682	629 aa	Known RBP	2.92	□□□□□ -1.94
UBS1	YBR165W	HSH155	P49955	971 aa	Known RBP	2.92	□□□□□ -1.94
UBS1	YBR165W	TAF6	P53040	516 aa		2.92	□□□□□ -1.94
UBS1	YBR165W	YGL118C	P53132	145 aa		2.92	□□□□□ -1.94
UBS1	YBR165W	ACT1	P60010	375 aa	Known RBP	2.92	□□□□□ -1.94
UBS1	YBR165W	RDL2	Q08742	149 aa	Known RBP	2.92	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 48 ms