RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 FRE3Q08905 711 aa8.03□□□□□ -1.12
LSR1LSR1 FRE6Q12473 712 aa8.03□□□□□ -1.12
LSR1LSR1 CAN1P04817 590 aa8.02□□□□□ -1.13
LSR1LSR1 RPS18AP0CX55 146 aaKnown RBP8.02□□□□□ -1.13
LSR1LSR1 RPS18BP0CX56 146 aaPredicted RBP8.02□□□□□ -1.13
LSR1LSR1 SEC12P11655 471 aa8.02□□□□□ -1.13
LSR1LSR1 YCL002CP25565 263 aa8.02□□□□□ -1.13
LSR1LSR1 CDC12P32468 407 aaKnown RBP8.02□□□□□ -1.13
LSR1LSR1 SUI1P32911 108 aaKnown RBP8.02□□□□□ -1.13
LSR1LSR1 SFC1P33303 322 aa8.02□□□□□ -1.13
LSR1LSR1 SHE2P36068 246 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
LSR1LSR1 DTR1P38125 572 aa8.02□□□□□ -1.13
LSR1LSR1 PAU24P38155 120 aa8.02□□□□□ -1.13
LSR1LSR1 LEU5P38702 357 aa8.02□□□□□ -1.13
LSR1LSR1 FET3P38993 636 aa8.02□□□□□ -1.13
LSR1LSR1 PTI1P39927 425 aaPredicted RBP8.02□□□□□ -1.13
LSR1LSR1 FHN1P53279 174 aa8.02□□□□□ -1.13
LSR1LSR1 REC102Q02721 264 aa8.02□□□□□ -1.13
LSR1LSR1 ELP4Q02884 456 aaKnown RBP8.02□□□□□ -1.13
LSR1LSR1 PRM15Q03262 622 aa8.02□□□□□ -1.13
LSR1LSR1 YML096WQ04489 525 aa8.02□□□□□ -1.13
LSR1LSR1 SEC13Q04491 297 aaKnown RBP8.02□□□□□ -1.13
LSR1LSR1 YMR252CQ04814 134 aa8.02□□□□□ -1.13
LSR1LSR1 COX20Q04935 205 aa8.02□□□□□ -1.13
LSR1LSR1 SYC1Q08553 188 aaPredicted RBP8.02□□□□□ -1.13
LSR1LSR1 YDL109CQ12103 647 aa8.02□□□□□ -1.13
LSR1LSR1 YHR213W-AQ8TGT4 77 aa8.02□□□□□ -1.13
LSR1LSR1 YBR085C-AO43137 85 aa8.01□□□□□ -1.13
LSR1LSR1 STE12P13574 688 aa8.01□□□□□ -1.13
LSR1LSR1 FUR1P18562 216 aaKnown RBP8.01□□□□□ -1.13
LSR1LSR1 FUN26P31381 517 aa8.01□□□□□ -1.13
LSR1LSR1 IFA38P38286 347 aa8.01□□□□□ -1.13
LSR1LSR1 ECM34P38728 170 aa8.01□□□□□ -1.13
LSR1LSR1 RRF1P38771 230 aa8.01□□□□□ -1.13
LSR1LSR1 HTD2P38790 280 aaKnown RBP8.01□□□□□ -1.13
LSR1LSR1 ECL1P48235 211 aa8.01□□□□□ -1.13
LSR1LSR1 RPS12P48589 143 aaKnown RBP8.01□□□□□ -1.13
LSR1LSR1 PMT5P52867 743 aa8.01□□□□□ -1.13
LSR1LSR1 YGL101WP53144 215 aa8.01□□□□□ -1.13
LSR1LSR1 POP6P53218 158 aa8.01□□□□□ -1.13
LSR1LSR1 MFB1Q04922 465 aa8.01□□□□□ -1.13
LSR1LSR1 YLR224WQ05947 369 aa8.01□□□□□ -1.13
LSR1LSR1 MLC2Q06580 163 aa8.01□□□□□ -1.13
LSR1LSR1 FDH1Q08911 376 aa8.01□□□□□ -1.13
LSR1LSR1 MPD2Q99316 277 aa8.01□□□□□ -1.13
LSR1LSR1 TAO3P40468 2376 aa8.01□□□□□ -1.13
LSR1LSR1 CDC9P04819 755 aa8□□□□□ -1.13
LSR1LSR1 RPS14AP06367 137 aaKnown RBP8□□□□□ -1.13
LSR1LSR1 NHP6BP11633 99 aaKnown RBP8□□□□□ -1.13
LSR1LSR1 ERD2P18414 219 aa8□□□□□ -1.13
LSR1LSR1 DOA4P32571 926 aa8□□□□□ -1.13
LSR1LSR1 YEF1P32622 495 aa8□□□□□ -1.13
LSR1LSR1 ECT1P33412 323 aa8□□□□□ -1.13
LSR1LSR1 OMA1P36163 345 aa8□□□□□ -1.13
LSR1LSR1 HXT5P38695 592 aa8□□□□□ -1.13
LSR1LSR1 RPS14BP39516 138 aaKnown RBP8□□□□□ -1.13
LSR1LSR1 PKP1P40530 394 aa8□□□□□ -1.13
LSR1LSR1 FAA4P47912 694 aaKnown RBP8□□□□□ -1.13
LSR1LSR1 SOK2P53438 785 aaPredicted RBP8□□□□□ -1.13
LSR1LSR1 YPL113CQ02961 396 aa8□□□□□ -1.13
LSR1LSR1 SIZ1Q04195 904 aa8□□□□□ -1.13
LSR1LSR1 ARV1Q06541 321 aa8□□□□□ -1.13
LSR1LSR1 SSK1Q07084 712 aa8□□□□□ -1.13
LSR1LSR1 OPI10Q08202 246 aa8□□□□□ -1.13
LSR1LSR1 MMT2Q08970 484 aa8□□□□□ -1.13
LSR1LSR1 YOL107WQ12239 342 aa8□□□□□ -1.13
LSR1LSR1 SPT15P13393 240 aaKnown RBP7.99□□□□□ -1.13
LSR1LSR1 AAC3P18238 307 aa7.99□□□□□ -1.13
LSR1LSR1 MCK1P21965 375 aaKnown RBP7.99□□□□□ -1.13
LSR1LSR1 PRP28P23394 588 aa7.99□□□□□ -1.13
LSR1LSR1 BUB3P26449 341 aa7.99□□□□□ -1.13
LSR1LSR1 PRE4P30657 266 aa7.99□□□□□ -1.13
LSR1LSR1 SDS22P36047 338 aa7.99□□□□□ -1.13
LSR1LSR1 APL3P38065 1025 aa7.99□□□□□ -1.13
LSR1LSR1 YMR144WP40214 342 aaKnown RBP7.99□□□□□ -1.13
LSR1LSR1 RPL10P41805 221 aaKnown RBP7.99□□□□□ -1.13
LSR1LSR1 PMT6P42934 759 aa7.99□□□□□ -1.13
LSR1LSR1 DPB11P47027 764 aaPredicted RBP7.99□□□□□ -1.13
LSR1LSR1 DOC1P53068 250 aa7.99□□□□□ -1.13
LSR1LSR1 YGL235WP53071 178 aa7.99□□□□□ -1.13
LSR1LSR1 GPG1P53130 126 aa7.99□□□□□ -1.13
LSR1LSR1 MTL1P53214 551 aa7.99□□□□□ -1.13
LSR1LSR1 GTF1P53260 183 aaPredicted RBP7.99□□□□□ -1.13
LSR1LSR1 RHO3Q00245 231 aaKnown RBP7.99□□□□□ -1.13
LSR1LSR1 RSM28Q03430 361 aa7.99□□□□□ -1.13
LSR1LSR1 SCS7Q03529 384 aa7.99□□□□□ -1.13
LSR1LSR1 YMR315WQ04869 349 aaKnown RBP7.99□□□□□ -1.13
LSR1LSR1 DET1Q99288 334 aaKnown RBP7.99□□□□□ -1.13
LSR1LSR1 KIN28P06242 306 aa7.98□□□□□ -1.13
LSR1LSR1 GAL7P08431 366 aa7.98□□□□□ -1.13
LSR1LSR1 HAP4P14064 554 aa7.98□□□□□ -1.13
LSR1LSR1 MGR1P25573 417 aa7.98□□□□□ -1.13
LSR1LSR1 ITR1P30605 584 aa7.98□□□□□ -1.13
LSR1LSR1 SFA1P32771 386 aa7.98□□□□□ -1.13
LSR1LSR1 SKN1P33336 771 aa7.98□□□□□ -1.13
LSR1LSR1 AUR1P36107 401 aaPredicted RBP7.98□□□□□ -1.13
LSR1LSR1 FMP46P36141 133 aaKnown RBP7.98□□□□□ -1.13
LSR1LSR1 LSM12P38828 187 aaKnown RBP7.98□□□□□ -1.13
LSR1LSR1 YHR122WP38829 231 aa7.98□□□□□ -1.13
LSR1LSR1 GIP2P40036 548 aa7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms