RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TRAPPC3O43617 180 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 TMEM253P0C7T8 217 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 RBM5P52756 815 aaKnown RBP eCLIP15□□□□□ -0.01
PHGDH-233ENST00000642021 BIRC3Q13489 604 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 SPRED3Q2MJR0 410 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 PHLDB3Q6NSJ2 640 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 RUFY4Q6ZNE9 571 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 YTHDF3Q7Z739 585 aaKnown RBP15□□□□□ -0.01
PHGDH-233ENST00000642021 SPATS2Q86XZ4 545 aaKnown RBP15□□□□□ -0.01
PHGDH-233ENST00000642021 DDX20Q9UHI6 824 aaKnown RBP15□□□□□ -0.01
PHGDH-233ENST00000642021 TTC7AQ9ULT0 858 aaPredicted RBP15□□□□□ -0.01
PHGDH-233ENST00000642021 UTP11Q9Y3A2 253 aaKnown RBP15□□□□□ -0.01
PHGDH-233ENST00000642021 ATP8B3O60423 1300 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 G3V3G9 751 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 FOXN3O00409 490 aaPredicted RBP15□□□□□ -0.01
PHGDH-233ENST00000642021 CYP3A4P08684 503 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 LMNB1P20700 586 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 PPP2R2AP63151 447 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 SLC15A2Q16348 729 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 DCAF8Q5TAQ9 597 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 BANK1Q8NDB2 785 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 PARVGQ9HBI0 331 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 AGPAT3Q9NRZ7 376 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 TMOD4Q9NZQ9 345 aa15□□□□□ -0.01
PHGDH-233ENST00000642021 NCANO14594 1321 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 EIF3DO15371 548 aaKnown RBP eCLIP14.99□□□□□ -0.01
PHGDH-233ENST00000642021 BMP3P12645 472 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 GAP43P17677 238 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 GUCY2CP25092 1073 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 ABCB5Q2M3G0 1257 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 KRT71Q3SY84 523 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 TMEM179Q6ZVK1 233 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 GMCL1P1Q8NEA9 526 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 MDM1Q8TC05 714 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 CTNNBL1Q8WYA6 563 aaPredicted RBP14.99□□□□□ -0.01
PHGDH-233ENST00000642021 RAPGEF5Q92565 580 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 GMCL1Q96IK5 515 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 TXLNGYQ9BZA5 131 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 INTS2Q9H0H0 1204 aaKnown RBP14.99□□□□□ -0.01
PHGDH-233ENST00000642021 EPB41L4BQ9H329 900 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 SEPT11Q9NVA2 429 aaKnown RBP14.99□□□□□ -0.01
PHGDH-233ENST00000642021 DMAC2Q9NW81 257 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 CHORDC1Q9UHD1 332 aaPredicted RBP14.99□□□□□ -0.01
PHGDH-233ENST00000642021 FRMPD4Q14CM0 1322 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 PSMD10O75832 226 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 GH2P01242 217 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 SHBGP04278 402 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 PTENP60484 403 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 MICALCLQ6ZW33 695 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 FAM114A2Q9NRY5 505 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 PRR12Q9ULL5 1215 aa14.99□□□□□ -0.01
PHGDH-233ENST00000642021 SIPA1L1O43166 1804 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 CFBP00751 764 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 MTMR3Q13615 1198 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 KIAA1755Q5JYT7 1200 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 UBAP2Q5T6F2 1119 aaKnown RBP14.98□□□□□ -0.01
PHGDH-233ENST00000642021 AGBL2Q5U5Z8 902 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 LRCH2Q5VUJ6 765 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 SLC20A1Q8WUM9 679 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 ZDHHC18Q9NUE0 388 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 APEX2Q9UBZ4 518 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 SRRM3A6NNA2 597 aaPredicted RBP14.98□□□□□ -0.01
PHGDH-233ENST00000642021 H0YHG0 523 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 PPFIA2O75334 1257 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 TNFAIP3P21580 790 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 DLG4P78352 724 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 DUPD1Q68J44 220 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 MCTP2Q6DN12 878 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 FAM178BQ8IXR5 827 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 ZDHHC14Q8IZN3 488 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 LMO3Q8TAP4 145 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 HOOK2Q96ED9 719 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 FMO2Q99518 471 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 MKNK1Q9BUB5 465 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 IDI2Q9BXS1 227 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 STK24Q9Y6E0 443 aa14.98□□□□□ -0.01
PHGDH-233ENST00000642021 TISP43B9A030 160 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 PPP1R12BO60237 982 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-233ENST00000642021 CAND2O75155 1236 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 ECE1P42892 770 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 DR1Q01658 176 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 BYSLQ13895 437 aaKnown RBP14.97□□□□□ -0.01
PHGDH-233ENST00000642021 NFIL3Q16649 462 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 KRT35Q92764 455 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 ERP44Q9BS26 406 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 OSBPL7Q9BZF2 842 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 CARD9Q9H257 536 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 SNX24Q9Y343 169 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 ALG6Q9Y672 507 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 QSER1Q2KHR3 1735 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 LRRC37AA6NMS7 1700 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 PHF20L1A8MW92 1017 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 MARCKSL1P49006 195 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 ACTN3Q08043 901 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-233ENST00000642021 ODR4Q5SWX8 454 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 PLCD4Q9BRC7 762 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 TUFT1Q9NNX1 390 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 LTBP4Q8N2S1 1624 aa14.97□□□□□ -0.01
PHGDH-233ENST00000642021 KIF13BQ9NQT8 1826 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 PIK3CDO00329 1044 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms