RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 TBC1D8BQ0IIM8 1120 aa19.31■□□□□ 0.68
PHGDH-232ENST00000641947 MKRN4PQ13434 485 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-232ENST00000641947 SYCP1Q15431 976 aa19.31■□□□□ 0.68
PHGDH-232ENST00000641947 DEFB115Q30KQ5 88 aa19.31■□□□□ 0.68
PHGDH-232ENST00000641947 CPLX3Q8WVH0 158 aa19.31■□□□□ 0.68
PHGDH-232ENST00000641947 SLC7A3Q8WY07 619 aa19.31■□□□□ 0.68
PHGDH-232ENST00000641947 BORCS6Q96GS4 357 aa19.31■□□□□ 0.68
PHGDH-232ENST00000641947 ACCSQ96QU6 501 aa19.31■□□□□ 0.68
PHGDH-232ENST00000641947 TMX1Q9H3N1 280 aa19.31■□□□□ 0.68
PHGDH-232ENST00000641947 TBX20Q9UMR3 447 aa19.31■□□□□ 0.68
PHGDH-232ENST00000641947 DENND3A2RUS2 1198 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 SKILP12757 684 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 CASP14P31944 242 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 OLFML2BQ68BL8 750 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 IQSEC1Q6DN90 963 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 SYCP3Q8IZU3 236 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 ZNF784Q8NCA9 323 aaPredicted RBP19.3■□□□□ 0.68
PHGDH-232ENST00000641947 ZSWIM2Q8NEG5 633 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 SOCS4Q8WXH5 440 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 ERGIC2Q96RQ1 377 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 C16orf70Q9BSU1 422 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 CREBZFQ9NS37 354 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 ARHGAP28Q9P2N2 729 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 SIK3Q9Y2K2 1263 aa19.3■□□□□ 0.68
PHGDH-232ENST00000641947 SLC16A3O15427 465 aaKnown RBP19.29■□□□□ 0.68
PHGDH-232ENST00000641947 MMP3P08254 477 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 HOXD8P13378 290 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-232ENST00000641947 RPL13P26373 211 aaKnown RBP19.29■□□□□ 0.68
PHGDH-232ENST00000641947 CYP2J2P51589 502 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 SMTNP53814 917 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 IRX5P78411 483 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-232ENST00000641947 TNFAIP2Q03169 654 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 SLC39A4Q6P5W5 647 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 HS2ST1Q7LGA3 356 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 FRMD5Q7Z6J6 570 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 MAP4K3Q8IVH8 894 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 OR6J1Q8NGC5 347 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 CBWD1Q9BRT8 395 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 TTYH3Q9C0H2 523 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 TMEM206Q9H813 350 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 GABRQQ9UN88 632 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 GNEQ9Y223 722 aaKnown RBP19.29■□□□□ 0.68
PHGDH-232ENST00000641947 IGKV6-21A0A0C4DH24 114 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 ANKRD63C9JTQ0 380 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 ZNF500O60304 480 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-232ENST00000641947 MFAP3LO75121 409 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 TPM2P07951 284 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 PSMC4P43686 418 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 SLC26A2P50443 739 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 LACTBP83111 547 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-232ENST00000641947 ERAP1Q9NZ08 941 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 TRPC6Q9Y210 931 aa19.29■□□□□ 0.68
PHGDH-232ENST00000641947 AKR1B15C9JRZ8 316 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-232ENST00000641947 EPHB6O15197 1021 aa19.28■□□□□ 0.68
PHGDH-232ENST00000641947 APLP1P51693 650 aa19.28■□□□□ 0.68
PHGDH-232ENST00000641947 CAPSQ13938 189 aa19.28■□□□□ 0.68
PHGDH-232ENST00000641947 PPFIBP1Q86W92 1011 aa19.28■□□□□ 0.68
PHGDH-232ENST00000641947 SLC9A9Q8IVB4 645 aa19.28■□□□□ 0.68
PHGDH-232ENST00000641947 LRRC71Q8N4P6 559 aa19.28■□□□□ 0.68
PHGDH-232ENST00000641947 SLC17A8Q8NDX2 589 aa19.28■□□□□ 0.68
PHGDH-232ENST00000641947 IFT74Q96LB3 600 aa19.28■□□□□ 0.68
PHGDH-232ENST00000641947 PCIF1Q9H4Z3 704 aa19.28■□□□□ 0.68
PHGDH-232ENST00000641947 ARMCX3Q9UH62 379 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-232ENST00000641947 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.28■□□□□ 0.68
PHGDH-232ENST00000641947 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.28■□□□□ 0.681e-6■□□□□ 10.9
PHGDH-232ENST00000641947 BRCA2P51587 3418 aa19.28■□□□□ 0.68
PHGDH-232ENST00000641947 TTC26A0AVF1 554 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 TBC1D8O95759 1140 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 ALDH1A1P00352 501 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 EDN1P05305 212 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 ADSSP30520 456 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 KCNMA1Q12791 1236 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 FKBP15Q5T1M5 1219 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 C12orf56Q8IXR9 622 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 GOLGA5Q8TBA6 731 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 HVCN1Q96D96 273 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 USP20Q9Y2K6 914 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 PPME1Q9Y570 386 aa19.27■□□□□ 0.68
PHGDH-232ENST00000641947 TRIP12Q14669 1992 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-232ENST00000641947 HBP1O60381 514 aa19.27■□□□□ 0.67
PHGDH-232ENST00000641947 EPB41P11171 864 aaKnown RBP19.27■□□□□ 0.67
PHGDH-232ENST00000641947 NAMPTP43490 491 aa19.27■□□□□ 0.67
PHGDH-232ENST00000641947 IRF5Q13568 498 aa19.27■□□□□ 0.67
PHGDH-232ENST00000641947 FAM186BQ8IYM0 893 aa19.27■□□□□ 0.67
PHGDH-232ENST00000641947 TRPV1Q8NER1 839 aa19.27■□□□□ 0.67
PHGDH-232ENST00000641947 TMEM174Q8WUU8 243 aa19.27■□□□□ 0.67
PHGDH-232ENST00000641947 SLC35C1Q96A29 364 aa19.27■□□□□ 0.67
PHGDH-232ENST00000641947 DYNC1LI2O43237 492 aaPredicted RBP19.26■□□□□ 0.67
PHGDH-232ENST00000641947 PPFIA4O75335 1185 aa19.26■□□□□ 0.67
PHGDH-232ENST00000641947 INSRRP14616 1297 aa19.26■□□□□ 0.67
PHGDH-232ENST00000641947 PSMC2P35998 433 aaKnown RBP19.26■□□□□ 0.67
PHGDH-232ENST00000641947 FCGRTP55899 365 aa19.26■□□□□ 0.67
PHGDH-232ENST00000641947 KCNH2Q12809 1159 aa19.26■□□□□ 0.67
PHGDH-232ENST00000641947 PRPF31Q8WWY3 499 aaKnown RBP19.26■□□□□ 0.67
PHGDH-232ENST00000641947 MKNK1Q9BUB5 465 aa19.26■□□□□ 0.67
PHGDH-232ENST00000641947 SUGCTQ9HAC7 445 aa19.26■□□□□ 0.67
PHGDH-232ENST00000641947 LRRIQ4A6NIV6 560 aa19.25■□□□□ 0.67
PHGDH-232ENST00000641947 C22orf31O95567 290 aa19.25■□□□□ 0.67
PHGDH-232ENST00000641947 GJB1P08034 283 aa19.25■□□□□ 0.67
PHGDH-232ENST00000641947 TRIM14Q14142 442 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms