RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 TMEM62Q0P6H9 643 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 AP3B2Q13367 1082 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 MTMR3Q13615 1198 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 TMEM266Q2M3C6 531 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 GNPTABQ3T906 1256 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 PLPP4Q5VZY2 271 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 MCTP2Q6DN12 878 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 KANK3Q6NY19 840 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 TEX2Q8IWB9 1127 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 DIS3L2Q8IYB7 885 aaKnown RBP8.37□□□□□ -1.07
PHGDH-225ENST00000641720 FAM184AQ8NB25 1140 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 SPRYD3Q8NCJ5 442 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 FBXO18Q8NFZ0 1043 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 BICD2Q8TD16 824 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 CRYGNQ8WXF5 182 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 MRPS27Q92552 414 aaKnown RBP8.37□□□□□ -1.07
PHGDH-225ENST00000641720 INTS4Q96HW7 963 aaKnown RBP8.37□□□□□ -1.07
PHGDH-225ENST00000641720 GLT8D2Q9H1C3 349 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 ADAM7Q9H2U9 754 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 TSHZ2Q9NRE2 1034 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 RGS18Q9NS28 235 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 TYW1Q9NV66 732 aaKnown RBP8.37□□□□□ -1.07
PHGDH-225ENST00000641720 RTEL1Q9NZ71 1219 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 NOC2LQ9Y3T9 749 aaKnown RBP8.37□□□□□ -1.07
PHGDH-225ENST00000641720 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-225ENST00000641720 PCDHA2Q9Y5H9 948 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 UBIAD1Q9Y5Z9 338 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 ANKRD11Q6UB99 2663 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-225ENST00000641720 IGF2RP11717 2491 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 SMG1Q96Q15 3661 aaKnown RBP8.36□□□□□ -1.07
PHGDH-225ENST00000641720 AKAP13Q12802 2813 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 IGKV6D-21A0A0A0MT36 114 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 FSD2A1L4K1 749 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 C2orf71A6NGG8 1288 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 BTBD18B2RXH4 712 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 WNT7AO00755 349 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 HOXB8P17481 243 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-225ENST00000641720 XBP1P17861 261 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 MARK3P27448 753 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 KRT2P35908 639 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 TRIM29Q14134 588 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 PLCB4Q15147 1175 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 GALNT17Q6IS24 598 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 PDE12Q6L8Q7 609 aaKnown RBP8.36□□□□□ -1.07
PHGDH-225ENST00000641720 KIAA1841Q6NSI8 718 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 GPRASP2Q96D09 838 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 CASD1Q96PB1 797 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 CELF4Q9BZC1 486 aaKnown RBP8.36□□□□□ -1.07
PHGDH-225ENST00000641720 ERAP1Q9NZ08 941 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 DLGAP2Q9P1A6 1054 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 LAMA5O15230 3695 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 NBEAQ8NFP9 2946 aa8.36□□□□□ -1.07
PHGDH-225ENST00000641720 CCDC194A0A1B0GVG4 234 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 SMIM35A0A1B0GVV1 85 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 FAM86B1E9PN63 330 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 N4BP1O75113 896 aaKnown RBP8.35□□□□□ -1.07
PHGDH-225ENST00000641720 CLASP2O75122 1294 aaKnown RBP8.35□□□□□ -1.07
PHGDH-225ENST00000641720 ATG7O95352 703 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 PAPLNO95428 1278 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 TDP2O95551 362 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 FOSP01100 380 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-225ENST00000641720 WEE2P0C1S8 567 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 FAM86B2P0C5J1 330 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 STAG3L1P0CL83 205 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 FGFR1P11362 822 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 PBX3P40426 434 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 SP4Q02446 784 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 ANGPT1Q15389 498 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 INF2Q27J81 1249 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 CLLU1OSQ5K130 101 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 PIK3AP1Q6ZUJ8 805 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 KRT25Q7Z3Z0 450 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 FAM228AQ86W67 206 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 TMEM173Q86WV6 379 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-225ENST00000641720 SLC39A11Q8N1S5 342 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 LINC01465Q8N7H1 131 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 CYP2W1Q8TAV3 490 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 TBCKQ8TEA7 893 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 SLC22A17Q8WUG5 538 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 SEPT1Q8WYJ6 367 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 LENG9Q96B70 501 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 CNTNAP3BQ96NU0 1288 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 VN1R3Q9BXE9 311 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 CNTNAP3Q9BZ76 1288 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 FAM49AQ9H0Q0 323 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-225ENST00000641720 USTQ9Y2C2 406 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 KIF3AQ9Y496 699 aa8.35□□□□□ -1.07
PHGDH-225ENST00000641720 PKD1L2Q7Z442 2459 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 IGLV3-22A0A075B6J6 115 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 VPS37CA5D8V6 355 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-225ENST00000641720 KRBA1A5PL33 1030 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 TBKBP1A7MCY6 615 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 B4GALT3O60512 393 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 EOMESO95936 686 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 LAG3P18627 525 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 ATP4AP20648 1035 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 SYT1P21579 422 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 ITIH3Q06033 890 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 PAK2Q13177 524 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 NONOQ15233 471 aaKnown RBP eCLIP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms