RNA–Protein interactions for RNA: ENST00000641715.1

SAMMSON-221, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-221ENST00000641715 SKIV2LQ15477 1246 aaKnown RBP13.14□□□□□ -0.31
SAMMSON-221ENST00000641715 MCTP1Q6DN14 999 aa13.14□□□□□ -0.31
SAMMSON-221ENST00000641715 ELAC1Q9H777 363 aaKnown RBP13.14□□□□□ -0.31
SAMMSON-221ENST00000641715 XPNPEP1Q9NQW7 623 aa13.14□□□□□ -0.31
SAMMSON-221ENST00000641715 ANKEF1Q9NU02 776 aa13.14□□□□□ -0.31
SAMMSON-221ENST00000641715 TMEM161AQ9NX61 479 aa13.14□□□□□ -0.31
SAMMSON-221ENST00000641715 THEGQ9P2T0 379 aa13.14□□□□□ -0.31
SAMMSON-221ENST00000641715 RWDD3Q9Y3V2 267 aa13.14□□□□□ -0.31
SAMMSON-221ENST00000641715 MUC3AQ02505 3323 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 DLL1O00548 723 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 GAS2O43903 313 aaKnown RBP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 RB1P06400 928 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 SRGAP2CP0DJJ0 459 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 FGFR1P11362 822 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 RARRES1P49788 294 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 PTGDRQ13258 359 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 ATXN2LQ8WWM7 1075 aaKnown RBP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 PSPC1Q8WXF1 523 aaKnown RBP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 MRPL38Q96DV4 380 aaKnown RBP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 MTRQ99707 1265 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 INO80BQ9C086 356 aaPredicted RBP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 ATP6V0A4Q9HBG4 840 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 TUFT1Q9NNX1 390 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 GTF3C3Q9Y5Q9 886 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 A0A0U1RQF3 1178 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 TBKBP1A7MCY6 615 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 H3BQV1 296 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 DGAT1O75907 488 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 XRCC6P12956 609 aaKnown RBP eCLIP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 TFF2Q03403 129 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 PTPROQ16827 1216 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 FERMT3Q86UX7 667 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 ECHDC2Q86YB7 292 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 TCP11Q8WWU5 503 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 C11orf84Q9BUA3 381 aaPredicted RBP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 PLVAPQ9BX97 442 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 MINDY3Q9H8M7 445 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 ALG13Q9NP73 1137 aaKnown RBP13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 CHST12Q9NRB3 414 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 RNF19AQ9NV58 838 aa13.13□□□□□ -0.31
SAMMSON-221ENST00000641715 ATG2AQ2TAZ0 1938 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 GRM6O15303 877 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 ASAP2O43150 1006 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 RPA1P27694 616 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 CUL4AQ13619 759 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 LARP1BQ659C4 914 aaKnown RBP13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 CATSPER4Q7RTX7 472 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 RNF149Q8NC42 400 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 ERMNQ8TAM6 284 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 ASB2Q96Q27 587 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 TYW1Q9NV66 732 aaKnown RBP13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 DACT1Q9NYF0 836 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 PLAGL2Q9UPG8 496 aa13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 PIN4Q9Y237 131 aaKnown RBP13.12□□□□□ -0.31
SAMMSON-221ENST00000641715 ITGB1P05556 798 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 ATF7P17544 494 aaPredicted RBP13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 MRPS5P82675 430 aaKnown RBP13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 CAMK1Q14012 370 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 PDIA5Q14554 519 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 MXD4Q14582 209 aaPredicted RBP13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 IL17AQ16552 155 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 ECM1Q16610 540 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 RILPL1Q5EBL4 403 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 TJAP1Q5JTD0 557 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 TWF2Q6IBS0 349 aaKnown RBP13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 SRGAP1Q7Z6B7 1085 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 ZNF598Q86UK7 904 aaKnown RBP13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 IGSF22Q8N9C0 903 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 KLHL23Q8NBE8 558 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 RNF169Q8NCN4 708 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 P2RX5Q93086 422 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 HLA-CQ95604 372 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 NACC1Q96RE7 527 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 TRAIPQ9BWF2 469 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 LRWD1Q9UFC0 647 aa13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 DBR1Q9UK59 544 aaKnown RBP13.11□□□□□ -0.31
SAMMSON-221ENST00000641715 BDP1A6H8Y1 2624 aa13.1□□□□□ -0.31
SAMMSON-221ENST00000641715 LAD1O00515 517 aa13.1□□□□□ -0.31
SAMMSON-221ENST00000641715 USO1O60763 962 aaKnown RBP13.1□□□□□ -0.31
SAMMSON-221ENST00000641715 EOMESO95936 686 aa13.1□□□□□ -0.31
SAMMSON-221ENST00000641715 HOXA11P31270 313 aaPredicted RBP13.1□□□□□ -0.31
SAMMSON-221ENST00000641715 ARL2P36404 184 aa13.1□□□□□ -0.31
SAMMSON-221ENST00000641715 PHKA2P46019 1235 aa13.1□□□□□ -0.31
SAMMSON-221ENST00000641715 CLLU1OSQ5K130 101 aa13.1□□□□□ -0.31
SAMMSON-221ENST00000641715 LRRC55Q6ZSA7 311 aa13.1□□□□□ -0.31
SAMMSON-221ENST00000641715 SPPL3Q8TCT6 385 aa13.1□□□□□ -0.31
SAMMSON-221ENST00000641715 ASAP3Q8TDY4 903 aa13.1□□□□□ -0.31
SAMMSON-221ENST00000641715 CWH43Q9H720 699 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms