RNA–Protein interactions for RNA: ENST00000641548.1

PPT1-216, Transcript of palmitoyl-protein thioesterase 1, human

Gene PPT1, Length 507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPT1-216	ENST00000641548	GBP2	P32456	591 aa	Predicted RBP	13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	LIFR	P42702	1097 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	BCAR1	P56945	870 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	EXOSC10	Q01780	885 aa	Known RBP	13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	TSGA10IP	Q3SY00	556 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	CMTR1	Q8N1G2	835 aa	Known RBP	13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	TMTC2	Q8N394	836 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	CTCFL	Q8NI51	663 aa	Predicted RBP	13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	ATRIP	Q8WXE1	791 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	GPRASP2	Q96D09	838 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	BORCS6	Q96GS4	357 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	CDHR1	Q96JP9	859 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	AZI2	Q9H6S1	392 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	PARD6A	Q9NPB6	346 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	PCDHGA2	Q9Y5H1	932 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	IRAK3	Q9Y616	596 aa		13.81	□□□□□ -0.2
PPT1-216	ENST00000641548	DDAH1	O94760	285 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	PLEKHA8P1	O95397	391 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	CTSA	P10619	480 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	ALDH7A1	P49419	539 aa	Known RBP	13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	DSC3	Q14574	896 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	PTPN14	Q15678	1187 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	KIZ	Q2M2Z5	673 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	CLLU1OS	Q5K130	101 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	DCLRE1A	Q6PJP8	1040 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	C15orf39	Q6ZRI6	1047 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	DHX32	Q7L7V1	743 aa	Known RBP	13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	SRBD1	Q8N5C6	995 aa	Known RBP	13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	RNF169	Q8NCN4	708 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	SMARCC2	Q8TAQ2	1214 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	MAP3K14	Q99558	947 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	OSMR	Q99650	979 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	EPC1	Q9H2F5	836 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	FBXO4	Q9UKT5	387 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	SLC12A7	Q9Y666	1083 aa		13.8	□□□□□ -0.2
PPT1-216	ENST00000641548	PNMA6F	A0A0J9YX94	578 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	ITGB5	P18084	799 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	KLRC1	P26715	233 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	HSPA4	P34932	840 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	CSTF1	Q05048	431 aa	Known RBP	13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	GIT2	Q14161	759 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	USP17L6P	Q6QN14	398 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	PPFIBP1	Q86W92	1011 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	TMEM173	Q86WV6	379 aa	Predicted RBP	13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	KIAA0319L	Q8IZA0	1049 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	CCDC82	Q8N4S0	544 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	HELQ	Q8TDG4	1101 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	KCNB2	Q92953	911 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	NXPE3	Q969Y0	559 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	COL26A1	Q96A83	441 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	EPS15L1	Q9UBC2	864 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	ANGPTL2	Q9UKU9	493 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	BRPF3	Q9ULD4	1205 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	SNX14	Q9Y5W7	946 aa		13.79	□□□□□ -0.2
PPT1-216	ENST00000641548	WDFY3	Q8IZQ1	3526 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	SLC30A4	O14863	429 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	KIF5B	P33176	963 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	CLCN4	P51793	760 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	POLG	P54098	1239 aa	Predicted RBP	13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	MTMR1	Q13613	665 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	KRT32	Q14532	448 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	ECHDC2	Q86YB7	292 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	FANCB	Q8NB91	859 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	CUL5	Q93034	780 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	JAKMIP1	Q96N16	626 aa	Known RBP	13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	MYADM	Q96S97	322 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	BCO2	Q9BYV7	579 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	JPH1	Q9HDC5	661 aa	Predicted RBP	13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	GMEB2	Q9UKD1	530 aa		13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.78	□□□□□ -0.2
PPT1-216	ENST00000641548	hCG_1642624	A0A1W2PR95	340 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	CLUH	O75153	1309 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	REC8	O95072	547 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	CALM1	P0DP23	149 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	CALM2	P0DP24	149 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	CALM3	P0DP25	149 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	KLRC2	P26717	231 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	GNAQ	P50148	359 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	STAT5B	P51692	787 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	CRYBB1	P53674	252 aa	Predicted RBP	13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	STARD6	P59095	220 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	COL4A3	Q01955	1670 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	SYNE3	Q6ZMZ3	975 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	PLPPR4	Q7Z2D5	763 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	DDX53	Q86TM3	631 aa	Known RBP	13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	SGMS1	Q86VZ5	419 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	MICU3	Q86XE3	530 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	ZBTB44	Q8NCP5	570 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	NETO1	Q8TDF5	533 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	STAM	Q92783	540 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	RRP36	Q96EU6	259 aa	Known RBP	13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	SPZ1	Q9BXG8	430 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	MRPL9	Q9BYD2	267 aa	Known RBP	13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	ZSCAN32	Q9NX65	697 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	SLC9A2	Q9UBY0	812 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	MYH15	Q9Y2K3	1946 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	CEP295	Q9C0D2	2601 aa		13.77	□□□□□ -0.21
PPT1-216	ENST00000641548	RALGAPA1	Q6GYQ0	2036 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms