RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 A0A0D9SFI3 127 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.32□□□□□ -0.92
SCARB2-226ENST00000640916 PALM3A6NDB9 673 aaPredicted RBP9.32□□□□□ -0.92
SCARB2-226ENST00000640916 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 ARHGAP33O14559 1287 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 CYTH3O43739 400 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 ITGB5P18084 799 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 METAP2P50579 478 aaKnown RBP eCLIP9.32□□□□□ -0.92
SCARB2-226ENST00000640916 CLCN4P51793 760 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 SHC2P98077 582 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 ZNF589Q86UQ0 364 aaPredicted RBP9.32□□□□□ -0.92
SCARB2-226ENST00000640916 CABP7Q86V35 215 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 LRRC43Q8N309 656 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 FAM227BQ96M60 508 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 DDX23Q9BUQ8 820 aaKnown RBP9.32□□□□□ -0.92
SCARB2-226ENST00000640916 SLC2A4RGQ9NR83 387 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 HELLSQ9NRZ9 838 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 DDX19BQ9UMR2 479 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 USP18Q9UMW8 372 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.32□□□□□ -0.92
SCARB2-226ENST00000640916 CNOT1A5YKK6 2376 aaKnown RBP9.32□□□□□ -0.92
SCARB2-226ENST00000640916 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 ANHXE9PGG2 379 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 GPR182O15218 404 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 LILRB3O75022 631 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 GPR32O75388 356 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 KLRC1P26715 233 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 BCAR1P56945 870 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 CSTF1Q05048 431 aaKnown RBP9.31□□□□□ -0.92
SCARB2-226ENST00000640916 PTPN14Q15678 1187 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 DCLRE1AQ6PJP8 1040 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 C15orf39Q6ZRI6 1047 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 ZNF598Q86UK7 904 aaKnown RBP9.31□□□□□ -0.92
SCARB2-226ENST00000640916 ECHDC2Q86YB7 292 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 GIMAP8Q8ND71 665 aaPredicted RBP9.31□□□□□ -0.92
SCARB2-226ENST00000640916 ST13P5Q8NFI4 369 aaPredicted RBP9.31□□□□□ -0.92
SCARB2-226ENST00000640916 ESR2Q92731 530 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 PIGSQ96S52 555 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 ZSCAN10Q96SZ4 725 aaPredicted RBP9.31□□□□□ -0.92
SCARB2-226ENST00000640916 RPP25Q9BUL9 199 aaKnown RBP9.31□□□□□ -0.92
SCARB2-226ENST00000640916 RIOX1Q9H6W3 641 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 WDR6Q9NNW5 1121 aaKnown RBP9.31□□□□□ -0.92
SCARB2-226ENST00000640916 ZSCAN32Q9NX65 697 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 ZSWIM5Q9P217 1185 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 ANGPTL2Q9UKU9 493 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 GINS2Q9Y248 185 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 ANKRD11Q6UB99 2663 aaPredicted RBP9.31□□□□□ -0.92
SCARB2-226ENST00000640916 WDR81Q562E7 1941 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 SALL3Q9BXA9 1300 aa9.31□□□□□ -0.92
SCARB2-226ENST00000640916 ZBTB42B2RXF5 422 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 B4E1Z4 1266 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 MEIS2O14770 477 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 MAP3K7O43318 606 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 PAPLNO95428 1278 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 PROS1P07225 676 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 RFX1P22670 979 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 POLGP54098 1239 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-226ENST00000640916 SPEM2Q0P670 501 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 HTR4Q13639 388 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 N4BP2L1Q5TBK1 243 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-226ENST00000640916 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 USP17L6PQ6QN14 398 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 TSSK4Q6SA08 328 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 DDX53Q86TM3 631 aaKnown RBP9.3□□□□□ -0.92
SCARB2-226ENST00000640916 HOMER1Q86YM7 354 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 CMASQ8NFW8 434 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-226ENST00000640916 NETO1Q8TDF5 533 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 ATRIPQ8WXE1 791 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 NXPE3Q969Y0 559 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 GPRASP2Q96D09 838 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 KLHL5Q96PQ7 755 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 OSMRQ99650 979 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 RHOBTB2Q9BYZ6 727 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 SPATA6Q9NWH7 488 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-226ENST00000640916 UBIAD1Q9Y5Z9 338 aa9.3□□□□□ -0.92
SCARB2-226ENST00000640916 SETXQ7Z333 2677 aaKnown RBP9.29□□□□□ -0.92
SCARB2-226ENST00000640916 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.29□□□□□ -0.92
SCARB2-226ENST00000640916 KANSL1LA0AUZ9 987 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 TM4SF5O14894 197 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 HOXA2O43364 376 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 LAMTOR5O43504 91 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 TBC1D4O60343 1298 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 GDF9O60383 454 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 B4GALT3O60512 393 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 CNPP09543 421 aaKnown RBP9.29□□□□□ -0.92
SCARB2-226ENST00000640916 TDGF1P13385 188 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 GBP2P32456 591 aaPredicted RBP9.29□□□□□ -0.92
SCARB2-226ENST00000640916 CA8P35219 290 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 CRYBB1P53674 252 aaPredicted RBP9.29□□□□□ -0.92
SCARB2-226ENST00000640916 FZD5Q13467 585 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 GIT2Q14161 759 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 SEC23AQ15436 765 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 KIZQ2M2Z5 673 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 MCMDC2Q4G0Z9 681 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 PLPPR4Q7Z2D5 763 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 NLRX1Q86UT6 975 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 PPFIBP1Q86W92 1011 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 IQCA1Q86XH1 822 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 HELQQ8TDG4 1101 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 SECISBP2LQ93073 1101 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms