RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 BAATQ14032 418 aaPredicted RBP18.87■□□□□ 0.61
SCARB2-223ENST00000640640 CATSPER4Q7RTX7 472 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 MICALL2Q8IY33 904 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 CCHCR1Q8TD31 782 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 RTFDC1Q9BY42 306 aaPredicted RBP18.87■□□□□ 0.61
SCARB2-223ENST00000640640 CNOT7Q9UIV1 285 aaKnown RBP18.87■□□□□ 0.61
SCARB2-223ENST00000640640 SOX5P35711 763 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 ZNF568Q3ZCX4 644 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 PASD1Q8IV76 773 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 FBXL13Q8NEE6 735 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 OTUD5Q96G74 571 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 POLR3FQ9H1D9 316 aaPredicted RBP18.87■□□□□ 0.61
SCARB2-223ENST00000640640 ESYT3A0FGR9 886 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 STYK1Q6J9G0 422 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 TEX13BQ9BXU2 312 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 SLC9A2Q9UBY0 812 aa18.87■□□□□ 0.61
SCARB2-223ENST00000640640 PRPSAP2O60256 369 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 GYS2P54840 703 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 IL9RQ01113 521 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 IFT88Q13099 833 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 CYFIP1Q7L576 1253 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 AFAP1L2Q8N4X5 818 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 CDKL2Q92772 493 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 LRRC4Q9HBW1 653 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 HAUS2Q9NVX0 235 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 ZNF211Q13398 564 aaPredicted RBP18.86■□□□□ 0.61
SCARB2-223ENST00000640640 SLC18A3Q16572 532 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 GSPT2Q8IYD1 628 aaKnown RBP18.86■□□□□ 0.61
SCARB2-223ENST00000640640 SPATA4Q8NEY3 305 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 PSMD14O00487 310 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 RFFLQ8WZ73 363 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 JPH1Q9HDC5 661 aaPredicted RBP18.86■□□□□ 0.61
SCARB2-223ENST00000640640 TBK1Q9UHD2 729 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 STK38LQ9Y2H1 464 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 PPP2R5CQ13362 524 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 TERF2Q15554 542 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 SLC38A10Q9HBR0 1119 aa18.86■□□□□ 0.61
SCARB2-223ENST00000640640 NGRNQ9NPE2 291 aaKnown RBP18.86■□□□□ 0.61
SCARB2-223ENST00000640640 SUN1O94901 812 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 UCHL3P15374 230 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 ARL4AP40617 200 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 CCNYQ8ND76 341 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 ZNF564Q8TBZ8 553 aaPredicted RBP18.85■□□□□ 0.61
SCARB2-223ENST00000640640 TMEM39BQ9GZU3 492 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 DNAJC17Q9NVM6 304 aaKnown RBP18.85■□□□□ 0.61
SCARB2-223ENST00000640640 GABPAQ06546 454 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 PKN1Q16512 942 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 ZNF699Q32M78 642 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 SPOUT1Q5T280 376 aaKnown RBP18.85■□□□□ 0.61
SCARB2-223ENST00000640640 DARS2Q6PI48 645 aaKnown RBP18.85■□□□□ 0.61
SCARB2-223ENST00000640640 RSRC2Q7L4I2 434 aaKnown RBP18.85■□□□□ 0.61
SCARB2-223ENST00000640640 SNX12Q9UMY4 172 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 PITPNM2Q9BZ72 1349 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 HMGB1P1B2RPK0 211 aaPredicted RBP18.85■□□□□ 0.61
SCARB2-223ENST00000640640 SLC26A4O43511 780 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 SLC37A4O43826 429 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 ZKSCAN8Q15776 578 aaPredicted RBP18.85■□□□□ 0.61
SCARB2-223ENST00000640640 CCDC197Q8NCU1 140 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 CFAP57Q96MR6 1250 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 SLC16A3O15427 465 aaKnown RBP18.85■□□□□ 0.61
SCARB2-223ENST00000640640 PSMA2P25787 234 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 VGLL2Q8N8G2 317 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 HEMGNQ9BXL5 484 aa18.85■□□□□ 0.61
SCARB2-223ENST00000640640 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.85■□□□□ 0.61
SCARB2-223ENST00000640640 PPP4R1Q8TF05 950 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 SLC4A9Q96Q91 983 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.84■□□□□ 0.61
SCARB2-223ENST00000640640 AGO2Q9UKV8 859 aaKnown RBP18.84■□□□□ 0.61
SCARB2-223ENST00000640640 PLAAQ9Y263 795 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 ACSL3O95573 720 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 NR3C2P08235 984 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 PCK1P35558 622 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 PHKA2P46019 1235 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 RHPN2Q8IUC4 686 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 GPD1LQ8N335 351 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 ZNF668Q96K58 619 aaPredicted RBP18.84■□□□□ 0.61
SCARB2-223ENST00000640640 RBAKQ9NYW8 714 aaPredicted RBP18.84■□□□□ 0.61
SCARB2-223ENST00000640640 MYBP10242 640 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 TBXAS1P24557 533 aaPredicted RBP18.84■□□□□ 0.61
SCARB2-223ENST00000640640 PDE1BQ01064 536 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 NUP85Q9BW27 656 aa18.84■□□□□ 0.61
SCARB2-223ENST00000640640 CNOT10Q9H9A5 744 aaKnown RBP18.84■□□□□ 0.61
SCARB2-223ENST00000640640 ZCCHC17Q9NP64 241 aaKnown RBP18.84■□□□□ 0.61
SCARB2-223ENST00000640640 EXOC1LA0A1B0GW35 172 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 DGAT1O75907 488 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 ACTN1P12814 892 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 TMED2Q15363 201 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 ARHGEF18Q6ZSZ5 1173 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 MYO5BQ9ULV0 1848 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 CD44P16070 742 aaKnown RBP18.83■□□□□ 0.61
SCARB2-223ENST00000640640 TTLL4Q14679 1199 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 BBS9Q3SYG4 887 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 ENOSF1Q7L5Y1 443 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 PDIK1LQ8N165 341 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 OR6B3Q8NGW1 331 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 KCND2Q9NZV8 630 aa18.83■□□□□ 0.61
SCARB2-223ENST00000640640 SCAF8Q9UPN6 1271 aaKnown RBP18.83■□□□□ 0.61
SCARB2-223ENST00000640640 SHPRHQ149N8 1683 aa18.83■□□□□ 0.6
SCARB2-223ENST00000640640 TJP3O95049 919 aa18.83■□□□□ 0.6
SCARB2-223ENST00000640640 NFX1Q12986 1120 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms