RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 DR1Q01658 176 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 CCDC174Q6PII3 467 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 FAM178BQ8IXR5 827 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 CCDC13Q8IYE1 715 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 CNPY4Q8N129 248 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 PRPF38AQ8NAV1 312 aaKnown RBP17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 RFFLQ8WZ73 363 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 WRAP73Q9P2S5 460 aaPredicted RBP17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 FAM198AQ9UFP1 575 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 FOXN3O00409 490 aaPredicted RBP17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 SLC16A3O15427 465 aaKnown RBP17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 DDX3YO15523 660 aaKnown RBP17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 ODR4Q5SWX8 454 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 LRCH2Q5VUJ6 765 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 ATP8B4Q8TF62 1192 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 BORCS6Q96GS4 357 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 CABS1Q96KC9 395 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 FAM20AQ96MK3 541 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 INTS2Q9H0H0 1204 aaKnown RBP17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 SLITRK6Q9H5Y7 841 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 ACP6Q9NPH0 428 aa17.93■□□□□ 0.46
HNRNPU-228ENST00000640306 GOLGA6L7A0A1B0GV03 622 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 ATMINO43313 823 aaPredicted RBP17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 HOXA10P31260 410 aaPredicted RBP17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 EMC10Q5UCC4 262 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 CCDC121Q6ZUS5 278 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 SP8Q8IXZ3 490 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 SYCP3Q8IZU3 236 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 SLC30A5Q8TAD4 765 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 KRT35Q92764 455 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 ELMO3Q96BJ8 720 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 C18orf8Q96DM3 657 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 SELENOSQ9BQE4 189 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 GPR88Q9GZN0 384 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 PARVGQ9HBI0 331 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 CD248Q9HCU0 757 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 TRAPPC3O43617 180 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 EXOC3O60645 756 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 SLCO1A2P46721 670 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 DLG4P78352 724 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 BMT2Q1RMZ1 405 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 ABCB5Q2M3G0 1257 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 PHLDB3Q6NSJ2 640 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 CPNE8Q86YQ8 564 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 CRAMP1Q96RY5 1269 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 STK33Q9BYT3 514 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 NYAP2Q9P242 653 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 MTMR3Q13615 1198 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 ZYXQ15942 572 aaKnown RBP17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 HS2ST1Q7LGA3 356 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 CPLX4Q7Z7G2 160 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 SUGP1Q8IWZ8 645 aaKnown RBP17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 FBXO25Q8TCJ0 367 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 CTTNBP2NLQ9P2B4 639 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 PI4KBQ9UBF8 816 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 FRMD4BQ9Y2L6 1034 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 DAAM1Q9Y4D1 1078 aa17.92■□□□□ 0.46
HNRNPU-228ENST00000640306 A0A1W2PRG0 241 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 TBX3O15119 743 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 FSBPO95073 299 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 BMP3P12645 472 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 LMNB1P20700 586 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 ECE1P42892 770 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 MYL7Q01449 175 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 POU5F1Q01860 360 aaKnown RBP17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 BIRC3Q13489 604 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 MOXD1Q6UVY6 613 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 C1orf186Q6ZWK4 172 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 GPATCH11Q8N954 259 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 CCDC114Q96M63 670 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 OSBPL7Q9BZF2 842 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 AGPAT3Q9NRZ7 376 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 A0A0A6YYK5 440 aaPredicted RBP17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 SEC16BQ96JE7 1060 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 PSMD1Q99460 953 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 HSD17B14Q9BPX1 270 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 FAM114A2Q9NRY5 505 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 PTPN22Q9Y2R2 807 aa17.91■□□□□ 0.46
HNRNPU-228ENST00000640306 TMEM253P0C7T8 217 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 RRP1BQ14684 758 aaKnown RBP17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 HHIPL2Q6UWX4 724 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 OTOP1Q7RTM1 612 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 DEFB132Q7Z7B7 95 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 ZSWIM2Q8NEG5 633 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.9■□□□□ 0.468e-11■■■■■ 32.1
HNRNPU-228ENST00000640306 MKL1Q969V6 931 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 BTBD6Q96KE9 485 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 JPH2Q9BR39 696 aaPredicted RBP17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 UBE2TQ9NPD8 197 aaPredicted RBP17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 OLFML3Q9NRN5 406 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 APEX2Q9UBZ4 518 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 DNM1LO00429 736 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 PPATQ06203 517 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 KAT5Q92993 513 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 POLR3CQ9BUI4 534 aaPredicted RBP17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 CCDC113Q9H0I3 377 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 TDRD3Q9H7E2 651 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms