RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 SLITRK6Q9H5Y7 841 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 PCDHA4Q9UN74 947 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 RPL26L1Q9UNX3 145 aaKnown RBP13.1□□□□□ -0.31
GFAP-228ENST00000638488 LRCH1Q9Y2L9 728 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 BICDL2A1A5D9 508 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 AGTP01019 485 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 MMP10P09238 476 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 SLURP2P0DP57 97 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 ALDH1B1P30837 517 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 IL17AQ16552 155 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 MAEAQ7L5Y9 396 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 CSGALNACT2Q8N6G5 542 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 CNOT6LQ96LI5 555 aaKnown RBP13.1□□□□□ -0.31
GFAP-228ENST00000638488 PRMT1Q99873 361 aaKnown RBP13.1□□□□□ -0.31
GFAP-228ENST00000638488 NOC4LQ9BVI4 516 aaKnown RBP13.1□□□□□ -0.31
GFAP-228ENST00000638488 ATP6V0A2Q9Y487 856 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 FLT3P36888 993 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 SLC1A4P43007 532 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 SCNN1BP51168 640 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 NAPAP54920 295 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 DDX42Q86XP3 938 aaKnown RBP eCLIP13.09□□□□□ -0.31
GFAP-228ENST00000638488 SYCP3Q8IZU3 236 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 LRRC47Q8N1G4 583 aaKnown RBP13.09□□□□□ -0.31
GFAP-228ENST00000638488 AGGF1Q8N302 714 aaeCLIP13.09□□□□□ -0.31
GFAP-228ENST00000638488 CERS5Q8N5B7 392 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 ANKRD13CQ8N6S4 541 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 RBBP8NLQ8NC74 664 aaPredicted RBP13.09□□□□□ -0.31
GFAP-228ENST00000638488 PTPRN2Q92932 1015 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 FAM163AQ96GL9 167 aaPredicted RBP13.09□□□□□ -0.31
GFAP-228ENST00000638488 PLIN2Q99541 437 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 DUSP9Q99956 384 aaKnown RBP13.09□□□□□ -0.31
GFAP-228ENST00000638488 EDEM3Q9BZQ6 932 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 STMN4Q9H169 189 aaPredicted RBP13.09□□□□□ -0.31
GFAP-228ENST00000638488 TXLNGQ9NUQ3 528 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 ZMYND8Q9ULU4 1186 aaPredicted RBP13.09□□□□□ -0.31
GFAP-228ENST00000638488 ZNF510Q9Y2H8 683 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 ATP5HO75947 161 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 UNC5CO95185 931 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 DESP17661 470 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 MTIF2P46199 727 aaKnown RBP13.09□□□□□ -0.31
GFAP-228ENST00000638488 FOXB2Q5VYV0 432 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 SLX1AQ9BQ83 275 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 CCDC28BQ9BUN5 200 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 DBNDD1Q9H9R9 158 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 DDX4Q9NQI0 724 aaKnown RBP13.09□□□□□ -0.31
GFAP-228ENST00000638488 PDP2Q9P2J9 529 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 SIK3Q9Y2K2 1263 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 SNED1Q8TER0 1413 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 RAD21O60216 631 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 FTCDO95954 541 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
GFAP-228ENST00000638488 SHBGP04278 402 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 PPP1R2P41236 205 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 ENOX2Q16206 610 aaKnown RBP13.09□□□□□ -0.31
GFAP-228ENST00000638488 WASHC2DQ5SRD0 308 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 NLGN1Q8N2Q7 840 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 GIMAP8Q8ND71 665 aaPredicted RBP13.09□□□□□ -0.31
GFAP-228ENST00000638488 ANKS1AQ92625 1134 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 COA1Q9GZY4 146 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 LRMDAQ9H2I8 198 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 TCP11L1Q9NUJ3 509 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 GALNT8Q9NY28 637 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 PCDHA6Q9UN73 950 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 PCDHA8Q9Y5H6 950 aa13.09□□□□□ -0.31
GFAP-228ENST00000638488 PALM3A6NDB9 673 aaPredicted RBP13.08□□□□□ -0.32
GFAP-228ENST00000638488 PP2D1A8MPX8 630 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 USP17L5A8MUK1 530 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 ATP6V1G1O75348 118 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 RHOBTB3O94955 611 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 CCDC84Q86UT8 332 aaPredicted RBP13.08□□□□□ -0.32
GFAP-228ENST00000638488 NEDD1Q8NHV4 660 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 TMEM237Q96Q45 408 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 USP40Q9NVE5 1235 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 CIDEBQ9UHD4 219 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 DAPK3O43293 454 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 CCNE1P24864 410 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 DEUP1Q05D60 604 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 ATP8B4Q8TF62 1192 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 ZNF333Q96JL9 665 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 PIGSQ96S52 555 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 IWS1Q96ST2 819 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 MTFR1LQ9H019 292 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 BARHL2Q9NY43 387 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 PRKAG3Q9UGI9 489 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 CD2APQ9Y5K6 639 aa13.08□□□□□ -0.32
GFAP-228ENST00000638488 GAKO14976 1311 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 DDX60LQ5H9U9 1706 aaKnown RBP13.07□□□□□ -0.32
GFAP-228ENST00000638488 PGRMC1O00264 195 aaKnown RBP13.07□□□□□ -0.32
GFAP-228ENST00000638488 RGS16O15492 202 aaPredicted RBP13.07□□□□□ -0.32
GFAP-228ENST00000638488 AKR1B1P15121 316 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 NPR1P16066 1061 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 GSTT1P30711 240 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 PTDSS1P48651 473 aaKnown RBP13.07□□□□□ -0.32
GFAP-228ENST00000638488 CACNB3P54284 484 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 GFPT1Q06210 699 aaPredicted RBP13.07□□□□□ -0.32
GFAP-228ENST00000638488 EHHADHQ08426 723 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 MUM1Q2TAK8 710 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms