RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 DLGAP3O95886 979 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 KRT73Q86Y46 540 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 CLCA2Q9UQC9 943 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 SLCO1A2P46721 670 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 CCNA1P78396 465 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 PKN2Q16513 984 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 OTUD7BQ6GQQ9 843 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 APOA5Q6Q788 366 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 LPIN2Q92539 896 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 RWDD2AQ9UIY3 292 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 MYO1CO00159 1063 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 HADHAP40939 763 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 PPP2R2AP63151 447 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 ARMC3Q5W041 872 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 ALKBH8Q96BT7 664 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 COPG2Q9UBF2 871 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 PRPF4O43172 522 aaKnown RBP eCLIP20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 CHMP1BQ7LBR1 199 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 NME9Q86XW9 330 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 hCG_1984214I3L0E3 225 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 ELF1P32519 619 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 DYNLT1P63172 113 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 GPATCH4Q5T3I0 446 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 TOGARAM2Q6ZUX3 1019 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 WDR11Q9BZH6 1224 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 SUGCTQ9HAC7 445 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 CHD4Q14839 1912 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 LRRN2O75325 713 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 TRIM49P0CI25 452 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 TRIM49CP0CI26 452 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 TMC5Q6UXY8 1006 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 MRPL50Q8N5N7 158 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 GRK2P25098 689 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 TBC1D10BQ4KMP7 808 aaPredicted RBP20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 NEK10Q6ZWH5 1172 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 SPRTNQ9H040 489 aaPredicted RBP20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 FBXL5Q9UKA1 691 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 KRT17Q04695 432 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 ATP11CQ8NB49 1132 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 VPS37AQ8NEZ2 397 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 ZSCAN10Q96SZ4 725 aaPredicted RBP20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 FOXP1Q9H334 677 aaPredicted RBP20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 FANCLQ9NW38 375 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 NEMP1O14524 444 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 KRT74Q7RTS7 529 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 EXT2Q93063 718 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 TSPAN17Q96FV3 270 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 ETNK1Q9HBU6 452 aa20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 DDX56Q9NY93 547 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-257ENST00000638009 WLSQ5T9L3 541 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 RMND5BQ96G75 393 aaPredicted RBP20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 KCNK16Q96T55 309 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 PCDHB15Q9Y5E8 787 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 INSRP06213 1382 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 FLT4P35916 1363 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 THEM5Q8N1Q8 247 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 MOSPD2Q8NHP6 518 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 TRPM2O94759 1503 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 RWDD4Q6NW29 188 aaKnown RBP20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 MYH14Q7Z406 1995 aaKnown RBP20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 TGFBR2P37173 567 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 ANXA11P50995 505 aaKnown RBP20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 C2orf54Q08AI8 447 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 SGSM1Q2NKQ1 1148 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 EGFL8Q99944 293 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 PLAAQ9Y263 795 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 PCDHA5Q9Y5H7 936 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 FAM135BQ49AJ0 1406 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 RNF103O00237 685 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 TRIM24O15164 1050 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 DDX50Q9BQ39 737 aaKnown RBP20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 ARIH1Q9Y4X5 557 aaPredicted RBP20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 SF3B1O75533 1304 aaKnown RBP eCLIP20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 TNNI3KQ59H18 835 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 ZNF654Q8IZM8 581 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 CASS4Q9NQ75 786 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 FPGT-TNNI3KV9GXZ4 949 aa20.49■□□□□ 0.87
CACNA1A-257ENST00000638009 ECDO95905 644 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 MAD2L2Q9UI95 211 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 DYTNA2CJ06 578 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 SPDYE5A6NIY4 337 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 SGSM2O43147 1006 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 TAP1Q03518 808 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 C1DQ13901 141 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 SPDYE7PQ495Y7 208 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 MLPHQ9BV36 600 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 NT5C2P49902 561 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 DDB1Q16531 1140 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 SH3KBP1Q96B97 665 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 GRID2IPA4D2P6 1211 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 FOXO3O43524 673 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 CCT8P50990 548 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 NCOA5Q9HCD5 579 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 A0A1W2PQ27 194 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 A0A1W2PQ64 194 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 A0A1W2PQD8 194 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 RGS5O15539 181 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 PHKA1P46020 1223 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 SHROOM1Q2M3G4 852 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms