RNA–Protein interactions for RNA: ENST00000637348.1

CHRNA7-226, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,136 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-226ENST00000637348 KSR1Q8IVT5 923 aa12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 C4orf19Q8IY42 314 aa12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 RNF169Q8NCN4 708 aa12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 POF1BQ8WVV4 589 aa12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 PABPC5Q96DU9 382 aaKnown RBP12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 CEP170P1Q96L14 293 aa12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 PLVAPQ9BX97 442 aa12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 EPHX3Q9H6B9 360 aa12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 C1orf112Q9NSG2 853 aa12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 RNF19AQ9NV58 838 aa12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 SMC3Q9UQE7 1217 aa12.86□□□□□ -0.35
CHRNA7-226ENST00000637348 C5orf42Q9H799 3197 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 A0A087WZ62 844 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 GAS2O43903 313 aaKnown RBP12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 DARSP14868 501 aaKnown RBP12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 YWHABP31946 246 aaKnown RBP12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 PBX3P40426 434 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 RFC5P40937 340 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 CYP4A11Q02928 519 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 TTC38Q5R3I4 469 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 MCTP1Q6DN14 999 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 RBM23Q86U06 439 aaKnown RBP12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 RHPN2Q8IUC4 686 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 TPH2Q8IWU9 490 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 ERMNQ8TAM6 284 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 P2RX5Q93086 422 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 DYDC2Q96IM9 177 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 FDXACB1Q9BRP7 624 aaPredicted RBP12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 LMAN2LQ9H0V9 348 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 CYP26B1Q9NR63 512 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 TYW1Q9NV66 732 aaKnown RBP12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 TMEM161AQ9NX61 479 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 RGL1Q9NZL6 768 aa12.85□□□□□ -0.35
CHRNA7-226ENST00000637348 IGKV6-21A0A0C4DH24 114 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 ZBTB39O15060 712 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 TBX10O75333 385 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 MAFO75444 373 aaPredicted RBP12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 OR52Z1P0C646 297 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 ZSCAN20P17040 1043 aaPredicted RBP12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 GJB2P29033 226 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 FAM189BP81408 668 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 SPIRE1Q08AE8 756 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 CTTNQ14247 550 aaKnown RBP12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 COL19A1Q14993 1142 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 LONRF3Q496Y0 759 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 LRRC55Q6ZSA7 311 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 ECHDC2Q86YB7 292 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 FAM178BQ8IXR5 827 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 COLGALT1Q8NBJ5 622 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 TCP11Q8WWU5 503 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 NLRP4Q96MN2 994 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 CASD1Q96PB1 797 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 MTMR9Q96QG7 549 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 EIF2AK1Q9BQI3 630 aaKnown RBP12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 BACH2Q9BYV9 841 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 GCOM2Q9BZD3 368 aaPredicted RBP12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 CWH43Q9H720 699 aa12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 SUCLA2Q9P2R7 463 aaPredicted RBP12.84□□□□□ -0.35
CHRNA7-226ENST00000637348 CD2BP2O95400 341 aaKnown RBP12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 ATF7P17544 494 aaPredicted RBP12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 SFPQP23246 707 aaKnown RBP eCLIP12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 U2AF2P26368 475 aaKnown RBP eCLIP12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 ZNF174Q15697 407 aa12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 CTC1Q2NKJ3 1217 aa12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 XKR9Q5GH70 373 aa12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 CLLU1OSQ5K130 101 aa12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 HAUS3Q68CZ6 603 aa12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 ZNF410Q86VK4 478 aa12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 THNSL1Q8IYQ7 743 aa12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 PSPC1Q8WXF1 523 aaKnown RBP12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 RAB34Q9BZG1 259 aa12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 PCDHB12Q9Y5F1 795 aa12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 GTF3C3Q9Y5Q9 886 aa12.83□□□□□ -0.36
CHRNA7-226ENST00000637348 FAM86C2PA6NEL3 165 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 POTEMA6NI47 508 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 PER2O15055 1255 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 FGF18O76093 207 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 LYPLA2O95372 231 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 COL9A1P20849 921 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 SSTR3P32745 418 aaPredicted RBP12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 NRIP1P48552 1158 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 ERVFC1P60507 584 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 EMC2Q15006 297 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 NAALADL2Q58DX5 795 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 HELQQ8TDG4 1101 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 LPPQ93052 612 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 TMEM143Q96AN5 459 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 MTRQ99707 1265 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 TMEM117Q9H0C3 514 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 TMEM60Q9H2L4 133 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 DHX33Q9H6R0 707 aaKnown RBP12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 ELAC1Q9H777 363 aaKnown RBP12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 TUFT1Q9NNX1 390 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 ANKEF1Q9NU02 776 aa12.82□□□□□ -0.36
CHRNA7-226ENST00000637348 COL4A3BPQ9Y5P4 624 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms