RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 PPP1R12BO60237 982 aaPredicted RBP23.35■■□□□ 1.33
CLN5-215ENST00000636767 BBOX1O75936 387 aa23.35■■□□□ 1.33
CLN5-215ENST00000636767 SCNN1DP51172 638 aa23.35■■□□□ 1.33
CLN5-215ENST00000636767 PMS2P54278 862 aa23.35■■□□□ 1.33
CLN5-215ENST00000636767 PWP2Q15269 919 aaKnown RBP23.35■■□□□ 1.33
CLN5-215ENST00000636767 NFIL3Q16649 462 aa23.35■■□□□ 1.33
CLN5-215ENST00000636767 CYP2W1Q8TAV3 490 aa23.35■■□□□ 1.33
CLN5-215ENST00000636767 NEK9Q8TD19 979 aa23.35■■□□□ 1.33
CLN5-215ENST00000636767 SUGT1Q9Y2Z0 365 aa23.35■■□□□ 1.33
CLN5-215ENST00000636767 RIMBP2O15034 1052 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 CTNND1O60716 968 aaKnown RBP23.34■■□□□ 1.33
CLN5-215ENST00000636767 TAL1P17542 331 aaPredicted RBP23.34■■□□□ 1.33
CLN5-215ENST00000636767 NFIAQ12857 509 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 DHX34Q14147 1143 aaKnown RBP23.34■■□□□ 1.33
CLN5-215ENST00000636767 KIAA1755Q5JYT7 1200 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 P3H4Q92791 437 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 RNF25Q96BH1 459 aaPredicted RBP23.34■■□□□ 1.33
CLN5-215ENST00000636767 CCDC17Q96LX7 622 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 AMNQ9BXJ7 453 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 INTS2Q9H0H0 1204 aaKnown RBP23.34■■□□□ 1.33
CLN5-215ENST00000636767 KIAA0391O15091 583 aaKnown RBP23.34■■□□□ 1.33
CLN5-215ENST00000636767 FAM13AO94988 1023 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 VCAM1P19320 739 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 CIITAP33076 1130 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 MAPK7Q13164 816 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 SLC15A2Q16348 729 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 USH1GQ495M9 461 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 FAM196AQ6ZSG2 479 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 KSR1Q8IVT5 923 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 PARP9Q8IXQ6 854 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 PIGOQ8TEQ8 1089 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 MKL1Q969V6 931 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 SGSM3Q96HU1 749 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 ZNF317Q96PQ6 595 aaPredicted RBP23.34■■□□□ 1.33
CLN5-215ENST00000636767 MKNK1Q9BUB5 465 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 TMOD4Q9NZQ9 345 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 SNX24Q9Y343 169 aa23.34■■□□□ 1.33
CLN5-215ENST00000636767 FAM196BA6NMK8 535 aa23.33■■□□□ 1.33
CLN5-215ENST00000636767 ATP2C2O75185 946 aa23.33■■□□□ 1.33
CLN5-215ENST00000636767 CHN1P15882 459 aa23.33■■□□□ 1.33
CLN5-215ENST00000636767 PLTPP55058 493 aa23.33■■□□□ 1.33
CLN5-215ENST00000636767 CHADLQ6NUI6 762 aa23.33■■□□□ 1.33
CLN5-215ENST00000636767 ZFPM1Q8IX07 1006 aa23.33■■□□□ 1.33
CLN5-215ENST00000636767 MYCT1Q8N699 235 aa23.33■■□□□ 1.33
CLN5-215ENST00000636767 FBXO25Q8TCJ0 367 aa23.33■■□□□ 1.33
CLN5-215ENST00000636767 HVCN1Q96D96 273 aa23.33■■□□□ 1.33
CLN5-215ENST00000636767 PGM2Q96G03 612 aa23.33■■□□□ 1.33
CLN5-215ENST00000636767 SIPA1L1O43166 1804 aa23.33■■□□□ 1.33
CLN5-215ENST00000636767 TRIM49P0CI25 452 aa23.33■■□□□ 1.32
CLN5-215ENST00000636767 TRIM49CP0CI26 452 aa23.33■■□□□ 1.32
CLN5-215ENST00000636767 RDXP35241 583 aaKnown RBP23.33■■□□□ 1.32
CLN5-215ENST00000636767 SNCBQ16143 134 aa23.33■■□□□ 1.32
CLN5-215ENST00000636767 PREPLQ4J6C6 727 aaPredicted RBP23.33■■□□□ 1.32
CLN5-215ENST00000636767 DENND2CQ68D51 928 aa23.33■■□□□ 1.32
CLN5-215ENST00000636767 AADACL2Q6P093 401 aa23.33■■□□□ 1.32
CLN5-215ENST00000636767 ATXN2LQ8WWM7 1075 aaKnown RBP23.33■■□□□ 1.32
CLN5-215ENST00000636767 ADAM7Q9H2U9 754 aa23.33■■□□□ 1.32
CLN5-215ENST00000636767 KDM4CQ9H3R0 1056 aa23.33■■□□□ 1.32
CLN5-215ENST00000636767 SEPT11Q9NVA2 429 aaKnown RBP23.33■■□□□ 1.32
CLN5-215ENST00000636767 APEX2Q9UBZ4 518 aa23.33■■□□□ 1.32
CLN5-215ENST00000636767 LRRC37AA6NMS7 1700 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 LY75O60449 1722 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 ANKRD62A6NC57 917 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 MMEP08473 750 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 GHRP10912 638 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 TNFAIP3P21580 790 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 MMP13P45452 471 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 XRCC4Q13426 336 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 CTTNQ14247 550 aaKnown RBP23.32■■□□□ 1.32
CLN5-215ENST00000636767 FAM228AQ86W67 206 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 GRHL1Q9NZI5 618 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 RPTORQ8N122 1335 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 UBAP1LF5GYI3 381 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 FOSP01100 380 aaPredicted RBP23.32■■□□□ 1.32
CLN5-215ENST00000636767 PTGIRP43119 386 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 DRG2P55039 364 aaKnown RBP23.32■■□□□ 1.32
CLN5-215ENST00000636767 C1orf186Q6ZWK4 172 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 C18orf8Q96DM3 657 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 SELENOSQ9BQE4 189 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 COA1Q9GZY4 146 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 CXorf56Q9H5V9 222 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 NYAP2Q9P242 653 aa23.32■■□□□ 1.32
CLN5-215ENST00000636767 KRT13P13646 458 aa23.31■■□□□ 1.32
CLN5-215ENST00000636767 ARHGAP44Q17R89 818 aa23.31■■□□□ 1.32
CLN5-215ENST00000636767 FAM182BQ5T319 152 aa23.31■■□□□ 1.32
CLN5-215ENST00000636767 UBAP2Q5T6F2 1119 aaKnown RBP23.31■■□□□ 1.32
CLN5-215ENST00000636767 FBXO11Q86XK2 927 aa23.31■■□□□ 1.32
CLN5-215ENST00000636767 FIZ1Q96SL8 496 aa23.31■■□□□ 1.32
CLN5-215ENST00000636767 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.31■■□□□ 1.32
CLN5-215ENST00000636767 RASAL2Q9UJF2 1139 aa23.31■■□□□ 1.32
CLN5-215ENST00000636767 PHF2O75151 1096 aa23.3■■□□□ 1.32
CLN5-215ENST00000636767 HOXA13P31271 388 aaPredicted RBP23.3■■□□□ 1.32
CLN5-215ENST00000636767 MMP14P50281 582 aa23.3■■□□□ 1.32
CLN5-215ENST00000636767 CYP2J2P51589 502 aa23.3■■□□□ 1.32
CLN5-215ENST00000636767 KIF22Q14807 665 aa23.3■■□□□ 1.32
CLN5-215ENST00000636767 APOBEC3HQ6NTF7 200 aaKnown RBP23.3■■□□□ 1.32
CLN5-215ENST00000636767 SLC30A10Q6XR72 485 aa23.3■■□□□ 1.32
CLN5-215ENST00000636767 CCDC197Q8NCU1 140 aa23.3■■□□□ 1.32
CLN5-215ENST00000636767 AZI2Q9H6S1 392 aa23.3■■□□□ 1.32
CLN5-215ENST00000636767 CCDC169A6NNP5 214 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms