RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 PATE3B3GLJ2 98 aa5.65□□□□□ -1.5
CLN5-212ENST00000636602 HGSO14964 777 aaPredicted RBP5.65□□□□□ -1.5
CLN5-212ENST00000636602 SLC27A2O14975 620 aa5.65□□□□□ -1.5
CLN5-212ENST00000636602 TPD52L2O43399 206 aaKnown RBP5.65□□□□□ -1.5
CLN5-212ENST00000636602 H2AFYO75367 372 aaKnown RBP5.65□□□□□ -1.5
CLN5-212ENST00000636602 U2AF1L5P0DN76 240 aaPredicted RBP5.65□□□□□ -1.5
CLN5-212ENST00000636602 U2AF1Q01081 240 aaKnown RBP eCLIP5.65□□□□□ -1.5
CLN5-212ENST00000636602 ACAP2Q15057 778 aa5.65□□□□□ -1.5
CLN5-212ENST00000636602 ESRP1Q6NXG1 681 aaKnown RBP5.65□□□□□ -1.5
CLN5-212ENST00000636602 CC2D1AQ6P1N0 951 aaPredicted RBP5.65□□□□□ -1.5
CLN5-212ENST00000636602 ZZZ3Q8IYH5 903 aa5.65□□□□□ -1.5
CLN5-212ENST00000636602 DLG3Q92796 817 aa5.65□□□□□ -1.5
CLN5-212ENST00000636602 TCF7L1Q9HCS4 588 aa5.65□□□□□ -1.5
CLN5-212ENST00000636602 RIC8BQ9NVN3 520 aa5.65□□□□□ -1.5
CLN5-212ENST00000636602 MYOTQ9UBF9 498 aa5.65□□□□□ -1.5
CLN5-212ENST00000636602 KLHL33A6NCF5 533 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 VSTM5A8MXK1 200 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 LTFP02788 710 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 MYL1P05976 194 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 PTPN1P18031 435 aaKnown RBP5.64□□□□□ -1.51
CLN5-212ENST00000636602 GJA4P35212 333 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 EPHB4P54760 987 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 NANOS3P60323 173 aaKnown RBP5.64□□□□□ -1.51
CLN5-212ENST00000636602 KRT85P78386 507 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 TUSC3Q13454 348 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 HLTFQ14527 1009 aaKnown RBP eCLIP5.64□□□□□ -1.51
CLN5-212ENST00000636602 ODF1Q14990 250 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 PDCD1Q15116 288 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 EMC4Q5J8M3 183 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 TMEM240Q5SV17 173 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 EFCAB2Q5VUJ9 269 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 BTBD8Q5XKL5 378 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 CYP4F22Q6NT55 531 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 PPP4R4Q6NUP7 873 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.64□□□□□ -1.51
CLN5-212ENST00000636602 TGFBRAP1Q8WUH2 860 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 LMBR1Q8WVP7 490 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 RTF1Q92541 710 aaKnown RBP5.64□□□□□ -1.51
CLN5-212ENST00000636602 HSPBAP1Q96EW2 488 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 SMOC1Q9H4F8 434 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 MSRAQ9UJ68 235 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 PNMA8BQ9ULN7 279 aaPredicted RBP5.64□□□□□ -1.51
CLN5-212ENST00000636602 PCDHB4Q9Y5E5 795 aa5.64□□□□□ -1.51
CLN5-212ENST00000636602 PRAMEF25A6NGN4 478 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 TRIM75PA6NK02 468 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 PCDHGA12O60330 932 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 ZNF623O75123 536 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 IL33O95760 270 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 CYP2C19P33261 490 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 GPR3P46089 330 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 SLC6A11P48066 632 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 RHBDL3P58872 404 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 PPP2CBP62714 309 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 PPP2CAP67775 309 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 FOXE3Q13461 319 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 CATSPEREQ5SY80 951 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 KSR2Q6VAB6 950 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 STK32CQ86UX6 486 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 DCP2Q8IU60 420 aaKnown RBP5.63□□□□□ -1.51
CLN5-212ENST00000636602 PHOSPHO1Q8TCT1 267 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 PMM1Q92871 262 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 CLIP3Q96DZ5 547 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 LRGUKQ96M69 825 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 AP5M1Q9H0R1 490 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 IKZF4Q9H2S9 585 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 ARNT2Q9HBZ2 717 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 CCM2LQ9NUG4 571 aaPredicted RBP5.63□□□□□ -1.51
CLN5-212ENST00000636602 DNAJC28Q9NX36 388 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 ZBTB21Q9ULJ3 1066 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 SIT1Q9Y3P8 196 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 TELO2Q9Y4R8 837 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 PCDHGA9Q9Y5G4 932 aaKnown RBP5.63□□□□□ -1.51
CLN5-212ENST00000636602 PCDHGA8Q9Y5G5 932 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 PCDHGA7Q9Y5G6 932 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 PCDHGA6Q9Y5G7 932 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 PCDHGA3Q9Y5H0 932 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 PCDHGA2Q9Y5H1 932 aa5.63□□□□□ -1.51
CLN5-212ENST00000636602 FAM90A27PA6NNH2 459 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 FOXP2O15409 715 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 TADA3O75528 432 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 C4BPAP04003 597 aaKnown RBP5.62□□□□□ -1.51
CLN5-212ENST00000636602 FNTBP49356 437 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 EPHA5P54756 1037 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 ABHD18Q0P651 414 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 UBE4AQ14139 1066 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 EPHA7Q15375 998 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 MINDY4Q4G0A6 757 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 MIIPQ5JXC2 388 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 CERS3Q8IU89 383 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 TRIM48Q8IWZ4 208 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 CMTR2Q8IYT2 770 aaKnown RBP5.62□□□□□ -1.51
CLN5-212ENST00000636602 FAM26EQ8N5C1 309 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 SEC14L1Q92503 715 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 ERCC4Q92889 916 aaPredicted RBP5.62□□□□□ -1.51
CLN5-212ENST00000636602 MBD6Q96DN6 1003 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 ZNF496Q96IT1 587 aaPredicted RBP5.62□□□□□ -1.51
CLN5-212ENST00000636602 C16orf92Q96LL3 132 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 TEKT5Q96M29 485 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 ACAP3Q96P50 834 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 JADE2Q9NQC1 790 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms