RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	MLXIP	Q9HAP2	919 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	ABCF3	Q9NUQ8	709 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	USP40	Q9NVE5	1235 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	STK32B	Q9NY57	414 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	ITGB1BP2	Q9UKP3	347 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	MYH4	Q9Y623	1939 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	MAGEA13P	A6NCF6	341 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	BACH1	O14867	736 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	E2F6	O75461	281 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	CHN1	P15882	459 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	MCM7	P33993	719 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	RAD23B	P54727	409 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	CCDC15	Q0P6D6	951 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	KRT71	Q3SY84	523 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	GPATCH4	Q5T3I0	446 aa	Known RBP	11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	KLHDC7A	Q5VTJ3	777 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	DTHD1	Q6ZMT9	781 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	SLC51A	Q86UW1	340 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	STAG2	Q8N3U4	1231 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	SMYD1	Q8NB12	490 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	SMC1B	Q8NDV3	1235 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.62	□□□□□ -0.55	2e-6	■■□□□ 14.5
CHD2-223	ENST00000636306	PGM2	Q96G03	612 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	RMDN2	Q96LZ7	410 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	AK8	Q96MA6	479 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	ZDHHC15	Q96MV8	337 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	KRT12	Q99456	494 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	GLT8D2	Q9H1C3	349 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	TMEM165	Q9HC07	324 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	PREB	Q9HCU5	417 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	MTMR4	Q9NYA4	1195 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	TMEM59L	Q9UK28	342 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	COMMD3-BMI1	R4GMX3	469 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	ADAMTSL1	Q8N6G6	1762 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	ESYT3	A0FGR9	886 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	RAD51C	O43502	376 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	GTPBP6	O43824	516 aa	Predicted RBP	11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	GJB6	O95452	261 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	PDHA1	P08559	390 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	TPBGL	P0DKB5	382 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	ECHS1	P30084	290 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	GSTT1	P30711	240 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	GRIN1	Q05586	938 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	EARS2	Q5JPH6	523 aa	Known RBP	11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	RNF220	Q5VTB9	566 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	ARMCX6	Q7L4S7	300 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	TMEM237	Q96Q45	408 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	NAP1L4	Q99733	375 aa	Known RBP	11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	RXFP1	Q9HBX9	757 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	TXLNG	Q9NUQ3	528 aa		11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.62	□□□□□ -0.55
CHD2-223	ENST00000636306	ARFGEF1	Q9Y6D6	1849 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	IGKV6D-41	A0A0C4DH26	115 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306		A8MUI8	341 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306		M0R2N6	131 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	ZNF263	O14978	683 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	PEX11A	O75192	247 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	SKI	P12755	728 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	IDO1	P14902	403 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	ZFX	P17010	805 aa	Predicted RBP	11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	AFM	P43652	599 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	CRK	P46108	304 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	GJA8	P48165	433 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	ERVK-9	P63128	1117 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	LSAMP	Q13449	338 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	GSTA3	Q16772	222 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	DOK7	Q18PE1	504 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	REXO1	Q8N1G1	1221 aa	Known RBP	11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	CERS5	Q8N5B7	392 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	PIGO	Q8TEQ8	1089 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	IRGQ	Q8WZA9	623 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	HAPLN3	Q96S86	360 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	RIOX1	Q9H6W3	641 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	EXOC1	Q9NV70	894 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	SMARCAL1	Q9NZC9	954 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	FBXL5	Q9UKA1	691 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	PCDHA6	Q9UN73	950 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	ARL2BP	Q9Y2Y0	163 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	DAAM1	Q9Y4D1	1078 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	PCDHA8	Q9Y5H6	950 aa		11.61	□□□□□ -0.55
CHD2-223	ENST00000636306	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.6	□□□□□ -0.55
CHD2-223	ENST00000636306		F8VZ95	297 aa		11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	ECE2	O60344	883 aa		11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	VIL1	P09327	827 aa	Known RBP	11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	SNHG28	P0DPA3	235 aa		11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	ZNF24	P17028	368 aa		11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	EIF4B	P23588	611 aa	Known RBP	11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	HOXA7	P31268	230 aa	Predicted RBP	11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	MAGEA1	P43355	309 aa		11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	PSMD7	P51665	324 aa		11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	ADCY7	P51828	1080 aa		11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	CYP27A1	Q02318	531 aa		11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	SULT2A1	Q06520	285 aa		11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	MPP3	Q13368	585 aa		11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	CCDC92	Q53HC0	331 aa	Predicted RBP	11.6	□□□□□ -0.55
CHD2-223	ENST00000636306	FKBP15	Q5T1M5	1219 aa		11.6	□□□□□ -0.55

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