RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 NOC3LQ8WTT2 800 aaKnown RBP16.99■□□□□ 0.31
CLN8-209ENST00000635970 DNAJC7Q99615 494 aa16.99■□□□□ 0.31
CLN8-209ENST00000635970 GPR20Q99678 358 aa16.99■□□□□ 0.31
CLN8-209ENST00000635970 SLC9A2Q9UBY0 812 aa16.99■□□□□ 0.31
CLN8-209ENST00000635970 NFASCO94856 1347 aa16.99■□□□□ 0.31
CLN8-209ENST00000635970 A0A0U1RQJ8 604 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 GCFC2P16383 781 aaKnown RBP16.98■□□□□ 0.31
CLN8-209ENST00000635970 PSMC6P62333 389 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 BRDTQ58F21 947 aaPredicted RBP16.98■□□□□ 0.31
CLN8-209ENST00000635970 RETREG2Q8NC44 543 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 ATRIPQ8WXE1 791 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 NUP58Q9BVL2 599 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 LUC7L2Q9Y383 392 aaKnown RBP16.98■□□□□ 0.31
CLN8-209ENST00000635970 ANO9A1A5B4 782 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 KRT86O43790 486 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 ZEB2O60315 1214 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 PPFIA4O75335 1185 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 CCNE2O96020 404 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 MCM7P33993 719 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 LONP1P36776 959 aaKnown RBP16.98■□□□□ 0.31
CLN8-209ENST00000635970 DGKDQ16760 1214 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 PDXDC2PQ6P474 469 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 TRIM50Q86XT4 487 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 AFAP1L1Q8TED9 768 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 IPO4Q8TEX9 1081 aaKnown RBP16.98■□□□□ 0.31
CLN8-209ENST00000635970 NELFBQ8WX92 580 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 IQCDQ96DY2 449 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 VPS16Q9H269 839 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 STARD7Q9NQZ5 370 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 CAPN11Q9UMQ6 739 aa16.98■□□□□ 0.31
CLN8-209ENST00000635970 LRRIQ3A6PVS8 624 aaPredicted RBP16.97■□□□□ 0.31
CLN8-209ENST00000635970 N4BP1O75113 896 aaKnown RBP16.97■□□□□ 0.31
CLN8-209ENST00000635970 UBXN1Q04323 297 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 PTGDRQ13258 359 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 ZNF174Q15697 407 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 LRCH2Q5VUJ6 765 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 CCDC70Q6NSX1 233 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 CCDC170Q8IYT3 715 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 NOA1Q8NC60 698 aaKnown RBP16.97■□□□□ 0.31
CLN8-209ENST00000635970 HAS1Q92839 578 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 SLC5A5Q92911 643 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 GLT1D1Q96MS3 346 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 THAP9Q9H5L6 903 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 KCNMB3Q9NPA1 279 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 RSPH14Q9UHP6 348 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 GSTTP1A0A1W2PQM5 241 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 HOXD8P13378 290 aaPredicted RBP16.97■□□□□ 0.31
CLN8-209ENST00000635970 CYLC1P35663 651 aaPredicted RBP16.97■□□□□ 0.31
CLN8-209ENST00000635970 TCF7P36402 384 aaPredicted RBP16.97■□□□□ 0.31
CLN8-209ENST00000635970 ACTR2P61160 394 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 KCNB1Q14721 858 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 LRRC26Q2I0M4 334 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 SMYD4Q8IYR2 804 aaPredicted RBP16.97■□□□□ 0.31
CLN8-209ENST00000635970 COG1Q8WTW3 980 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 PPM1EQ8WY54 764 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 KAT2BQ92831 832 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 VTI1AQ96AJ9 217 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 NAP1L4Q99733 375 aaKnown RBP16.97■□□□□ 0.31
CLN8-209ENST00000635970 TMEM60Q9H2L4 133 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 FAM204AQ9H8W3 233 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 LCMT1Q9UIC8 334 aa16.97■□□□□ 0.31
CLN8-209ENST00000635970 A6NNZ2 444 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 LGALS16A8MUM7 142 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 CHMP2AO43633 222 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 GAS7O60861 476 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 RPN1P04843 607 aaKnown RBP16.96■□□□□ 0.31
CLN8-209ENST00000635970 LGALS2P05162 132 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 DNM2P50570 870 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 STIM1Q13586 685 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 MEA1Q16626 185 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 TUBB8Q3ZCM7 444 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 MTG1Q9BT17 334 aaPredicted RBP16.96■□□□□ 0.31
CLN8-209ENST00000635970 SUGCTQ9HAC7 445 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 TBC1D22BQ9NU19 505 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 GUCA1BQ9UMX6 200 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 GRIN2DO15399 1336 aa16.96■□□□□ 0.31
CLN8-209ENST00000635970 MYH9P35579 1960 aaKnown RBP16.96■□□□□ 0.31
CLN8-209ENST00000635970 RNF40O75150 1001 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 PSMD10O75832 226 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 IPO7O95373 1038 aaKnown RBP16.95■□□□□ 0.3
CLN8-209ENST00000635970 CORO7P57737 925 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 ITIH3Q06033 890 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 LRRC31Q6UY01 552 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 SLC39A5Q6ZMH5 540 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 C16orf70Q9BSU1 422 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 UNC45AQ9H3U1 944 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 ZNHIT6Q9NWK9 470 aaKnown RBP16.95■□□□□ 0.3
CLN8-209ENST00000635970 TAB2Q9NYJ8 693 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 HPCAL4Q9UM19 191 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 PRPF6O94906 941 aaKnown RBP16.95■□□□□ 0.3
CLN8-209ENST00000635970 SYF2O95926 243 aaKnown RBP16.95■□□□□ 0.3
CLN8-209ENST00000635970 F2P00734 622 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 PPP1R2P41236 205 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 RGS19P49795 217 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 CDK17Q00537 523 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 CALCRLQ16602 461 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 CCDC122Q5T0U0 273 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 NCAPH2Q6IBW4 605 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 SEPT1Q8WYJ6 367 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 TEKT3Q9BXF9 490 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms